RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 SUPT3HB4E1H0 165 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 G3V3Y1 287 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 K7EQM0 130 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 SCAMP2O15127 329 aaKnown RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 ATP6V1G1O75348 118 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 HLA-DRAP01903 254 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 CSF2P04141 144 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 PROS1P07225 676 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 RPA2P15927 270 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 TCN1P20061 433 aaPredicted RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 CYP3A5P20815 502 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 ATP6V1C1P21283 382 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 PCMT1P22061 227 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 IDSP22304 550 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 CD1BP29016 333 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 GPR4P46093 362 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 SUCLG1P53597 346 aaKnown RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 UCNP55089 124 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 CLDN8P56748 225 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 GPX6P59796 221 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 RPS8P62241 208 aaKnown RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 POLR2GP62487 172 aaKnown RBP eCLIP2.25□□□□□ -2.05
CLK1-204ENST00000432425 RPS4XP62701 263 aaKnown RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 CNTN2Q02246 1040 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 KLF5Q13887 457 aaPredicted RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 ZNF311Q5JNZ3 666 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 TCHHL1Q5QJ38 904 aaPredicted RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 CLVS2Q5SYC1 327 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 THOC7Q6I9Y2 204 aaKnown RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 IGFL3Q6UXB1 125 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 TMEM26Q6ZUK4 368 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 VPS36Q86VN1 386 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 GPR65Q8IYL9 337 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 C14orf178Q8N769 122 aaPredicted RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 TRPV1Q8NER1 839 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 OR52J3Q8NH60 311 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 LKAAEAR1Q8TD35 194 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 RASD2Q96D21 266 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 IMMP1LQ96LU5 166 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 ZNF607Q96SK3 696 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 LRRC19Q9H756 370 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 ROPN1Q9HAT0 212 aaPredicted RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 ESM1Q9NQ30 184 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 MIEF1Q9NQG6 463 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 SLC39A1Q9NY26 324 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 PDP1Q9P0J1 537 aaPredicted RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 APOBEC3BQ9UH17 382 aaKnown RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 CYTH4Q9UIA0 394 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 PACSIN2Q9UNF0 486 aaPredicted RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 PLA2G4CQ9UP65 541 aa2.25□□□□□ -2.05
CLK1-204ENST00000432425 FOXA2Q9Y261 457 aaPredicted RBP2.25□□□□□ -2.05
CLK1-204ENST00000432425 PRDM2Q13029 1718 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 PTCH1Q13635 1447 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 IGLV8-61A0A075B6I0 122 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 ARHGEF35A5YM69 484 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 GOLGA8JA6NMD2 632 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 OR5K4A6NMS3 321 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 GOLGA8TH3BQL2 631 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 PSMD11O00231 422 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 SH2D1BO14796 132 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 ZNF264O43296 627 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 LCMT2O60294 686 aaKnown RBP2.24□□□□□ -2.05
CLK1-204ENST00000432425 DFNA5O60443 496 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 SNNO75324 88 aaPredicted RBP2.24□□□□□ -2.05
CLK1-204ENST00000432425 SERF1AO75920 110 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 PDE5AO76074 875 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 OAS1P00973 400 aaKnown RBP2.24□□□□□ -2.05
CLK1-204ENST00000432425 IGLV1-47P01700 117 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 HOXC4P09017 264 aaPredicted RBP2.24□□□□□ -2.05
CLK1-204ENST00000432425 GOLGA8HP0CJ92 632 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 CT45A10P0DMU9 189 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 CPN1P15169 458 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 PTNP21246 168 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 RRM2P31350 389 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 IL2RGP31785 369 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 RPS5P46782 204 aaKnown RBP2.24□□□□□ -2.05
CLK1-204ENST00000432425 CKAP4Q07065 602 aaKnown RBP2.24□□□□□ -2.05
CLK1-204ENST00000432425 BST1Q10588 318 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 SLAQ13239 276 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 GPR176Q14439 515 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 KRT31Q15323 416 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 MAPRE2Q15555 327 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 SGCAQ16586 387 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 PDK4Q16654 411 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 ZNF829Q3KNS6 432 aaPredicted RBP2.24□□□□□ -2.05
CLK1-204ENST00000432425 SLC36A3Q495N2 470 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 BEX5Q5H9J7 111 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 PHYHD1Q5SRE7 291 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 NCR3LG1Q68D85 454 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 TWF2Q6IBS0 349 aaKnown RBP2.24□□□□□ -2.05
CLK1-204ENST00000432425 CDC42EP5Q6NZY7 148 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 IGFL2Q6UWQ7 119 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 ARSKQ6UWY0 536 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 ADAMTSL5Q6ZMM2 481 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 KATNAL2Q8IYT4 538 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 CEND1Q8N111 149 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 PYROXD2Q8N2H3 581 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 LEMD2Q8NC56 503 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 RFESDQ8TAC1 157 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 RAB3IL1Q8TBN0 382 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms