RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 TMUB1Q9BVT8 246 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 OR11A1Q9GZK7 315 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 SLC52A3Q9NQ40 469 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 POLE3Q9NRF9 147 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 ZIM2Q9NZV7 527 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 ANK3Q12955 4377 aaKnown RBP11.13□□□□□ -0.63
SMPD4-204ENST00000430682 ALPK2Q86TB3 2170 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 AGAP5A6NIR3 686 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 RFXANKO14593 260 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 CASKO14936 926 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 RAMP1O60894 148 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 PLAUP00749 431 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 RAF1P04049 648 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 IL6P05231 212 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 NUDT7P0C024 238 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 PGCP20142 388 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 SLC7A1P30825 629 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 NTF4P34130 210 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 DIO1P49895 249 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 POLR2JP52435 117 aaKnown RBP11.12□□□□□ -0.63
SMPD4-204ENST00000430682 RAC3P60763 192 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 GSTA3Q16772 222 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 RPS26P11Q5JNZ5 115 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-204ENST00000430682 SLC2A7Q6PXP3 512 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 CXorf67Q86X51 503 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-204ENST00000430682 VRK2Q86Y07 508 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 MSRB3Q8IXL7 192 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 GABRG1Q8N1C3 465 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 GTF2H4Q92759 462 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 C7orf26Q96N11 449 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 ZBTB18Q99592 522 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 PAIP1Q9H074 479 aaKnown RBP11.12□□□□□ -0.63
SMPD4-204ENST00000430682 TPT1P8Q9HAU6 139 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 GLRX2Q9NS18 164 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-204ENST00000430682 RLIMQ9NVW2 624 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 SLAMF8Q9P0V8 285 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 KLHL13Q9P2N7 655 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 PRSS50Q9UI38 385 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 SLC35A3Q9Y2D2 325 aa11.12□□□□□ -0.63
SMPD4-204ENST00000430682 DSPPQ9NZW4 1301 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 NAV3Q8IVL0 2385 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 CYTIPO60759 359 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 PRKD3O94806 890 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 GOSR1O95249 250 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 FESP07332 822 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 YES1P07947 543 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 TFPTP0C1Z6 253 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 ZCCHC18P0CG32 403 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 PRG2P13727 222 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 H2AFXP16104 143 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-204ENST00000430682 CCNA2P20248 432 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 IDH2P48735 452 aaKnown RBP11.11□□□□□ -0.63
SMPD4-204ENST00000430682 ADAM8P78325 824 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 FOXD4Q12950 439 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-204ENST00000430682 DEFB113Q30KQ7 82 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 SYT14P1Q58G82 188 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 MRPL2Q5T653 305 aaKnown RBP11.11□□□□□ -0.63
SMPD4-204ENST00000430682 C3orf33Q6P1S2 294 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 SEZ6L2Q6UXD5 910 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 ZNF836Q6ZNA1 936 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 TMPPEQ6ZT21 453 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 ATG4DQ86TL0 474 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-204ENST00000430682 TGIF2LYQ8IUE0 185 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 TRIML2Q8N7C3 387 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 WFDC11Q8NEX6 87 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 SLC38A5Q8WUX1 472 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 MTHFD2LQ9H903 347 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-204ENST00000430682 BCO1Q9HAY6 547 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 EXOSC3Q9NQT5 275 aaKnown RBP11.11□□□□□ -0.63
SMPD4-204ENST00000430682 SLC25A37Q9NYZ2 338 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 LIPT1Q9Y234 373 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 PCDHB14Q9Y5E9 798 aa11.11□□□□□ -0.63
SMPD4-204ENST00000430682 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-204ENST00000430682 TMEM72A0PK05 275 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 ZC3H12DA2A288 527 aaKnown RBP11.1□□□□□ -0.63
SMPD4-204ENST00000430682 FAM234BA2RU67 622 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 GJE1A6NN92 205 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 ZNF716A6NP11 495 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 SASH3O75995 380 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 GKN3PP0CG01 181 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 NR2F1P10589 423 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 IMPDH2P12268 514 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 PSMB1P20618 241 aaKnown RBP11.1□□□□□ -0.63
SMPD4-204ENST00000430682 ACAA2P42765 397 aaKnown RBP11.1□□□□□ -0.63
SMPD4-204ENST00000430682 RASGEF1BQ0VAM2 473 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 KEAP1Q14145 624 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 RNPS1Q15287 305 aaKnown RBP11.1□□□□□ -0.63
SMPD4-204ENST00000430682 PAGE3Q5JUK9 113 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 TMEM201Q5SNT2 666 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 BEND4Q6ZU67 534 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 CCDC103Q8IW40 242 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 MIER2Q8N344 545 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 CLIP4Q8N3C7 705 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 ARFGAP2Q8N6H7 521 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 ZNF563Q8TA94 476 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 LRRC8CQ8TDW0 803 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 WDR60Q8WVS4 1066 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 OIT3Q8WWZ8 545 aa11.1□□□□□ -0.63
SMPD4-204ENST00000430682 TMEM234Q8WY98 164 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms