RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 KLHL15Q96M94 604 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 NPAS1Q99742 590 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 POTEKPQ9BYX7 375 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 MMADHCQ9H3L0 296 aaPredicted RBP13.47□□□□□ -0.25
GARNL3-204ENST00000429629 TMEM27Q9HBJ8 222 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 CHRNA9Q9UGM1 479 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 OSGIN1Q9UJX0 560 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 SAMD4AQ9UPU9 718 aaKnown RBP13.47□□□□□ -0.25
GARNL3-204ENST00000429629 ZNF175Q9Y473 711 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 SNX13Q9Y5W8 968 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 H3BML4 177 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 LRRTM2O43300 516 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 DNPH1O43598 174 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 OPN1SWP03999 348 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 AGAP20933 346 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 TACR3P29371 465 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 TIMP3P35625 211 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 CBX1P83916 185 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 TRIM25Q14258 630 aaKnown RBP13.46□□□□□ -0.25
GARNL3-204ENST00000429629 CTU2Q2VPK5 515 aaKnown RBP13.46□□□□□ -0.25
GARNL3-204ENST00000429629 ACSF3Q4G176 576 aaPredicted RBP13.46□□□□□ -0.25
GARNL3-204ENST00000429629 MTX3Q5HYI7 312 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 C1orf185Q5T7R7 199 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 EEF1A1P5Q5VTE0 462 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 RTL6Q6ICC9 239 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 ZNF585AQ6P3V2 769 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 PGM2L1Q6PCE3 622 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 C5orf46Q6UWT4 87 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 B3GNT6Q6ZMB0 384 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 CHMP1BQ7LBR1 199 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 LACC1Q8IV20 430 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 OR5M9Q8NGP3 310 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 OR5M1Q8NGP8 315 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 WNT2BQ93097 391 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 SLC38A4Q969I6 547 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 SLC47A1Q96FL8 570 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 ZFP3Q96NJ6 502 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 TTYH2Q9BSA4 534 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 TIGARQ9NQ88 270 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 ACTR3BQ9P1U1 418 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 TINAGQ9UJW2 476 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 CAMK2AQ9UQM7 478 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 TRAPPC4Q9Y296 219 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 HDGFL3Q9Y3E1 203 aa13.46□□□□□ -0.25
GARNL3-204ENST00000429629 MYO18BQ8IUG5 2567 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 TMED7-TICAM2A0A0A6YYA0 188 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 MBD3L4A6NDZ8 208 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-204ENST00000429629 MBD3L3A6NE82 208 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-204ENST00000429629 MBD3L5A6NJ08 208 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-204ENST00000429629 SHISA8B8ZZ34 492 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 H0Y3Z8 333 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 CCL21O00585 134 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 TPST2O60704 377 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 THRBP10828 461 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 CXCR1P25024 350 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 SUCLG1P53597 346 aaKnown RBP13.45□□□□□ -0.26
GARNL3-204ENST00000429629 CLDN20P56880 219 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 RAC3P60763 192 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 NCALDP61601 193 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 TRAP1Q12931 704 aaKnown RBP13.45□□□□□ -0.26
GARNL3-204ENST00000429629 LRRC23Q53EV4 343 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-204ENST00000429629 RIPPLY2Q5TAB7 128 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 C1QL3Q5VWW1 255 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 RPTNQ6XPR3 784 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 ATG4DQ86TL0 474 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-204ENST00000429629 RNF148Q8N7C7 305 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 OR6T1Q8NGN1 323 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 OR2V1Q8NHB1 315 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 MBD3L2Q8NHZ7 208 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-204ENST00000429629 STK35Q8TDR2 534 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 C3orf49Q96BT1 292 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 MCHR1Q99705 422 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 TM9SF2Q99805 663 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 TUBA1CQ9BQE3 449 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 CTPS2Q9NRF8 586 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 GMPR2Q9P2T1 348 aaKnown RBP13.45□□□□□ -0.26
GARNL3-204ENST00000429629 TNFRSF10DQ9UBN6 386 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 RPS6KB2Q9UBS0 482 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 EGFL7Q9UHF1 273 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 SH3GLB1Q9Y371 365 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 TMED7Q9Y3B3 224 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 FAM215AQ9Y5M1 114 aa13.45□□□□□ -0.26
GARNL3-204ENST00000429629 A0A0B4J2E0 115 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 A0A0J9YW62 118 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 A0A1B0GWA3 101 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 A0A1B0GX12 115 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 A8MVM7 634 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 EBAG9O00559 213 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 FRS3O43559 492 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 NPIPB7O75200 414 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 DNAJC8O75937 253 aaPredicted RBP13.44□□□□□ -0.26
GARNL3-204ENST00000429629 SERPINA1P01009 418 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 CRHP06850 196 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 GLI4P10075 376 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 IL11P20809 199 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 HTR2AP28223 471 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 CEACAM8P31997 349 aaPredicted RBP13.44□□□□□ -0.26
GARNL3-204ENST00000429629 CARD18P57730 90 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 OR1Q1Q15612 314 aa13.44□□□□□ -0.26
GARNL3-204ENST00000429629 TMEM176BQ3YBM2 270 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms