RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 OSGIN1Q9UJX0 560 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 SLC5A6Q9Y289 635 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 POLR2HP52434 150 aaKnown RBP22.04■■□□□ 1.12
VEGFA-209ENST00000425836 SELENOWP63302 87 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 CTU2Q2VPK5 515 aaKnown RBP22.04■■□□□ 1.12
VEGFA-209ENST00000425836 ACSF3Q4G176 576 aaPredicted RBP22.04■■□□□ 1.12
VEGFA-209ENST00000425836 C1orf185Q5T7R7 199 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 RBM45Q8IUH3 476 aaKnown RBP22.04■■□□□ 1.12
VEGFA-209ENST00000425836 OR52E4Q8NGH9 312 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 OR10Q1Q8NGQ4 319 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 PROX1Q92786 737 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 FAM162AQ96A26 154 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 ADGRG7Q96K78 797 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 DMRTA2Q96SC8 542 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 SERINC1Q9NRX5 453 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 TESQ9UGI8 421 aaKnown RBP22.04■■□□□ 1.12
VEGFA-209ENST00000425836 ERRFI1Q9UJM3 462 aaPredicted RBP22.04■■□□□ 1.12
VEGFA-209ENST00000425836 PRPF19Q9UMS4 504 aaKnown RBP22.04■■□□□ 1.12
VEGFA-209ENST00000425836 SH3GLB1Q9Y371 365 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 MED12Q93074 2177 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 ESPL1Q14674 2120 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 A0A0J9YW62 118 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 KDM4EB2RXH2 506 aaPredicted RBP22.03■■□□□ 1.12
VEGFA-209ENST00000425836 SERPINA1P01009 418 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 SFTPDP35247 375 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 SRSF1Q07955 248 aaKnown RBP eCLIP22.03■■□□□ 1.129e-8■■■□□ 14.6
VEGFA-209ENST00000425836 NPTX1Q15818 432 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 TMEM176BQ3YBM2 270 aaPredicted RBP22.03■■□□□ 1.12
VEGFA-209ENST00000425836 C3orf33Q6P1S2 294 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 CBLL1Q75N03 491 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 LSRQ86X29 649 aaPredicted RBP22.03■■□□□ 1.12
VEGFA-209ENST00000425836 EID3Q8N140 333 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 MARVELD2Q8N4S9 558 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 LSMEM1Q8N8F7 131 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 VANGL1Q8TAA9 524 aaPredicted RBP22.03■■□□□ 1.12
VEGFA-209ENST00000425836 TPD52L3Q96J77 140 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 ZNF559Q9BR84 538 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 TRIM2Q9C040 744 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 PCDHAC1Q9H158 963 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 ADPRHL2Q9NX46 363 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 CHRNA9Q9UGM1 479 aa22.03■■□□□ 1.12
VEGFA-209ENST00000425836 HEATR5AQ86XA9 2040 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 TMED7-TICAM2A0A0A6YYA0 188 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 EIF1AYO14602 144 aaKnown RBP22.02■■□□□ 1.12
VEGFA-209ENST00000425836 ADAMDEC1O15204 470 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 GYG2O15488 501 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 TNFRSF1BP20333 461 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 SF3B4Q15427 424 aaKnown RBP eCLIP22.02■■□□□ 1.122e-10■■■□□ 18
VEGFA-209ENST00000425836 RPTNQ6XPR3 784 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 B3GNT6Q6ZMB0 384 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 ESPNLQ6ZVH7 1005 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 NCCRP1Q6ZVX7 275 aaPredicted RBP22.02■■□□□ 1.12
VEGFA-209ENST00000425836 ADGRE4PQ86SQ3 457 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 RANBP3LQ86VV4 465 aaPredicted RBP22.02■■□□□ 1.12
VEGFA-209ENST00000425836 C3orf49Q96BT1 292 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 KLHL15Q96M94 604 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 GORASP2Q9H8Y8 452 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 MAGEL2Q9UJ55 1249 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 SLC9A8Q9Y2E8 581 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 TMED7Q9Y3B3 224 aa22.02■■□□□ 1.12
VEGFA-209ENST00000425836 GJE1A6NN92 205 aa22.01■■□□□ 1.11
VEGFA-209ENST00000425836 GMNNO75496 209 aa22.01■■□□□ 1.11
VEGFA-209ENST00000425836 CCNA2P20248 432 aa22.01■■□□□ 1.11
VEGFA-209ENST00000425836 NCALDP61601 193 aa22.01■■□□□ 1.11
VEGFA-209ENST00000425836 CARM1Q86X55 608 aa22.01■■□□□ 1.11
VEGFA-209ENST00000425836 LZICQ8WZA0 190 aa22.01■■□□□ 1.11
VEGFA-209ENST00000425836 TRIB1Q96RU8 372 aa22.01■■□□□ 1.11
VEGFA-209ENST00000425836 MCHR1Q99705 422 aa22.01■■□□□ 1.11
VEGFA-209ENST00000425836 TTYH2Q9BSA4 534 aa22.01■■□□□ 1.11
VEGFA-209ENST00000425836 BTBD10Q9BSF8 475 aa22.01■■□□□ 1.11
VEGFA-209ENST00000425836 SNX13Q9Y5W8 968 aa22.01■■□□□ 1.11
VEGFA-209ENST00000425836 A0A1B0GWA3 101 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 CLCA1A8K7I4 914 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 TNFSF11O14788 317 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 FMO6PO60774 539 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 PDE5AO76074 875 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 ZNF682O95780 498 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 RPS3AP61247 264 aaKnown RBP22■■□□□ 1.11
VEGFA-209ENST00000425836 OR1Q1Q15612 314 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 DNAL1Q4LDG9 190 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 NSUN5P2Q63ZY6 315 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 PLXDC2Q6UX71 529 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 SEM1Q6ZVN7 128 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 CHMP1BQ7LBR1 199 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 VTCN1Q7Z7D3 282 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 OR10D3Q8NH80 312 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 OR2V1Q8NHB1 315 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 CLPTM1LQ96KA5 538 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 THTPAQ9BU02 230 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 CALHM2Q9HA72 323 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 TMEM27Q9HBJ8 222 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 DCAF13Q9NV06 445 aaKnown RBP22■■□□□ 1.11
VEGFA-209ENST00000425836 RPS6KB2Q9UBS0 482 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 SPIN1Q9Y657 262 aaPredicted RBP22■■□□□ 1.11
VEGFA-209ENST00000425836 GTF3C1Q12789 2109 aa22■■□□□ 1.11
VEGFA-209ENST00000425836 TMEM72A0PK05 275 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 CLEC18AA5D8T8 446 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 CD8B2A6NJW9 211 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 ARPC2O15144 300 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 ATP5HO75947 161 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms