RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 COL13A1Q5TAT6 717 aaPredicted RBP10.98□□□□□ -0.65
PTPRN-204ENST00000423636 OR4C6Q8NH72 309 aa10.98□□□□□ -0.65
PTPRN-204ENST00000423636 SENP5Q96HI0 755 aaPredicted RBP10.98□□□□□ -0.65
PTPRN-204ENST00000423636 SARGQ9BW04 601 aa10.98□□□□□ -0.65
PTPRN-204ENST00000423636 NXF5Q9H1B4 397 aaKnown RBP10.98□□□□□ -0.65
PTPRN-204ENST00000423636 OR10A5Q9H207 317 aa10.98□□□□□ -0.65
PTPRN-204ENST00000423636 SEMA6CQ9H3T2 930 aa10.98□□□□□ -0.65
PTPRN-204ENST00000423636 FKRPQ9H9S5 495 aa10.98□□□□□ -0.65
PTPRN-204ENST00000423636 DDX28Q9NUL7 540 aaKnown RBP10.98□□□□□ -0.65
PTPRN-204ENST00000423636 SCML1Q9UN30 329 aa10.98□□□□□ -0.65
PTPRN-204ENST00000423636 PEX16Q9Y5Y5 336 aa10.98□□□□□ -0.65
PTPRN-204ENST00000423636 DMXL1Q9Y485 3027 aa10.98□□□□□ -0.65
PTPRN-204ENST00000423636 GVINP1Q7Z2Y8 2422 aa10.98□□□□□ -0.65
PTPRN-204ENST00000423636 ARRDC5A6NEK1 342 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 TNFRSF10CO14798 259 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 ATP1B1P05026 303 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 DBIP07108 87 aaKnown RBP10.97□□□□□ -0.65
PTPRN-204ENST00000423636 CT45A8P0DMV1 189 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 CT45A9P0DMV2 189 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 PTHLHP12272 177 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 FPR3P25089 353 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 CD1CP29017 333 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 UGT2B10P36537 528 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 CLDN12P56749 244 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 YPEL5P62699 121 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 EFNB1P98172 346 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 MLLT11Q13015 90 aaPredicted RBP10.97□□□□□ -0.65
PTPRN-204ENST00000423636 DECR1Q16698 335 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 TIMM50Q3ZCQ8 353 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 KLHL22Q53GT1 634 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 CT45A2Q5DJT8 189 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 CDK20Q8IZL9 346 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 CAPSLQ8WWF8 208 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 MOAP1Q96BY2 351 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 B3GAT2Q9NPZ5 323 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 ASB6Q9NWX5 421 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 MASP2O00187 686 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 SCO2O43819 266 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 AQP2P41181 271 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 ZNHIT3Q15649 155 aaPredicted RBP10.97□□□□□ -0.65
PTPRN-204ENST00000423636 CEBPEQ15744 281 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 LPAL2Q16609 132 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 ATOH1Q92858 354 aaPredicted RBP10.97□□□□□ -0.65
PTPRN-204ENST00000423636 FGF11Q92914 225 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 FAM131CQ96AQ9 280 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 MOGAT1Q96PD6 335 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 TEAD3Q99594 435 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 NUDT22Q9BRQ3 303 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 WACQ9BTA9 647 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 CMAHPQ9Y471 501 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 V9GYH0 126 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 SHISA8B8ZZ34 492 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 SMLR1H3BR10 107 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 OR2B3O76000 313 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 SLITRK5O94991 958 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 IL7P13232 177 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 RNH1P13489 461 aaKnown RBP10.97□□□□□ -0.65
PTPRN-204ENST00000423636 FOLR1P15328 257 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 FZD5Q13467 585 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 DSG2Q14126 1118 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 TMEM201Q5SNT2 666 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 VASNQ6EMK4 673 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 CNIH2Q6PI25 160 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 CCDC190Q86UF4 302 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 SERPINA12Q8IW75 414 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 BCORP1Q8N888 145 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 KIAA1958Q8N8K9 716 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 ABHD8Q96I13 439 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 ARHGAP9Q9BRR9 750 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 SLC25A18Q9H1K4 315 aa10.97□□□□□ -0.65
PTPRN-204ENST00000423636 CHURC1-FNTBB4DL54 471 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 SYT5O00445 386 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 MBTPS2O43462 519 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 PLOD3O60568 738 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 KCNJ13O60928 360 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 AHCYP23526 432 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 ACAA2P42765 397 aaKnown RBP10.96□□□□□ -0.65
PTPRN-204ENST00000423636 FNTBP49356 437 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 RAB38P57729 211 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 RAB40BQ12829 278 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 SQSTM1Q13501 440 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 SLC25A35Q3KQZ1 300 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 ZNF362Q5T0B9 420 aaPredicted RBP10.96□□□□□ -0.65
PTPRN-204ENST00000423636 MEDAGQ5VYS4 303 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 RDH10Q8IZV5 341 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 HSD17B8Q92506 261 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 Q96M85 177 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 NPAS1Q99742 590 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 C8orf33Q9H7E9 229 aaPredicted RBP10.96□□□□□ -0.65
PTPRN-204ENST00000423636 DNAJB12Q9NXW2 375 aaKnown RBP10.96□□□□□ -0.65
PTPRN-204ENST00000423636 GTF2A1LQ9UNN4 478 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 SIGLEC7Q9Y286 467 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 RNF215Q9Y6U7 377 aa10.96□□□□□ -0.65
PTPRN-204ENST00000423636 CNOT1A5YKK6 2376 aaKnown RBP10.96□□□□□ -0.65
PTPRN-204ENST00000423636 GTPBP1O00178 669 aaKnown RBP10.96□□□□□ -0.66
PTPRN-204ENST00000423636 OR5F1O95221 314 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 SRP9P49458 86 aaKnown RBP10.96□□□□□ -0.66
PTPRN-204ENST00000423636 NR0B1P51843 470 aaKnown RBP10.96□□□□□ -0.66
PTPRN-204ENST00000423636 PSPHP78330 225 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 RSBN1Q5VWQ0 802 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms