RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 IDUAP35475 653 aa13.78□□□□□ -0.2
AP000550.1-201ENST00000420508 POLR2HP52434 150 aaKnown RBP13.78□□□□□ -0.2
AP000550.1-201ENST00000420508 LEXMQ3ZCV2 418 aa13.78□□□□□ -0.2
AP000550.1-201ENST00000420508 USP53Q70EK8 1073 aa13.78□□□□□ -0.2
AP000550.1-201ENST00000420508 P4HA3Q7Z4N8 544 aa13.78□□□□□ -0.2
AP000550.1-201ENST00000420508 ZNF565Q8N9K5 539 aa13.78□□□□□ -0.2
AP000550.1-201ENST00000420508 VRK1Q99986 396 aaPredicted RBP13.78□□□□□ -0.2
AP000550.1-201ENST00000420508 GON7Q9BXV9 100 aa13.78□□□□□ -0.2
AP000550.1-201ENST00000420508 TTTY10Q9BZA0 68 aa13.78□□□□□ -0.2
AP000550.1-201ENST00000420508 PAQR5Q9NXK6 330 aaPredicted RBP13.78□□□□□ -0.2
AP000550.1-201ENST00000420508 MMP17Q9ULZ9 603 aa13.78□□□□□ -0.2
AP000550.1-201ENST00000420508 HHLA2Q9UM44 414 aa13.78□□□□□ -0.2
AP000550.1-201ENST00000420508 A0A1W2PQ09 198 aa13.77□□□□□ -0.2
AP000550.1-201ENST00000420508 MEIOCA2RUB1 952 aa13.77□□□□□ -0.2
AP000550.1-201ENST00000420508 EIF4E2O60573 245 aaKnown RBP13.77□□□□□ -0.2
AP000550.1-201ENST00000420508 FKBP2P26885 142 aaKnown RBP13.77□□□□□ -0.2
AP000550.1-201ENST00000420508 OR51Q1Q8NH59 317 aa13.77□□□□□ -0.2
AP000550.1-201ENST00000420508 RSC1A1Q92681 617 aa13.77□□□□□ -0.2
AP000550.1-201ENST00000420508 GAL3ST1Q99999 423 aa13.77□□□□□ -0.2
AP000550.1-201ENST00000420508 SLC6A15Q9H2J7 730 aa13.77□□□□□ -0.2
AP000550.1-201ENST00000420508 USP36Q9P275 1121 aaKnown RBP13.77□□□□□ -0.2
AP000550.1-201ENST00000420508 AGAP14A8MT82 685 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 TSPAN9O75954 239 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 ZFAND5O76080 213 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 MT-ATP6P00846 226 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 CD3GP09693 182 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 POU3F3P20264 500 aaPredicted RBP13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 TCEA1P23193 301 aaKnown RBP13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 MMP11P24347 488 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 CSNK2A1P68400 391 aaPredicted RBP13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 EIF2B1Q14232 305 aaKnown RBP13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 CHRFAM7AQ494W8 412 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 SPATC1Q76KD6 591 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 CYB561A3Q8NBI2 242 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 COQ8AQ8NI60 647 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 LCORQ96JN0 433 aaPredicted RBP13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 TPSD1Q9BZJ3 242 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 TP63Q9H3D4 680 aaPredicted RBP13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 SLC17A4Q9Y2C5 497 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 TEX13DA0A0J9YY54 714 aaPredicted RBP13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 SULT1B1O43704 296 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 RAD51DO75771 328 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 RPS15P62841 145 aaKnown RBP13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 CAMK2DQ13557 499 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 MYLIPQ8WY64 445 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 SPTSSAQ969W0 71 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 OR10A5Q9H207 317 aa13.77□□□□□ -0.21
AP000550.1-201ENST00000420508 M0R129 80 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 AKAIN1P0CW23 69 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 CD27P26842 260 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 GPR19Q15760 415 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 ADPRMQ3LIE5 342 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 ZNF385BQ569K4 471 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 ZNF836Q6ZNA1 936 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 DIO2Q92813 273 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 SLC19A3Q9BZV2 496 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 TMEM165Q9HC07 324 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 MCCC2Q9HCC0 563 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 TRAV36DV7A0A075B6V5 113 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 FTCDNL1E5RQL4 147 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 CTGFP29279 349 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 CXCL12P48061 93 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 FOXK2Q01167 660 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 PUDPQ08623 228 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 KIAA0040Q15053 153 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 SGCAQ16586 387 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 CTU2Q2VPK5 515 aaKnown RBP13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 C8orf82Q6P1X6 216 aaPredicted RBP13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 CRB3Q9BUF7 120 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 NRIP3Q9NQ35 241 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 SNX11Q9Y5W9 270 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 TNS1Q9HBL0 1735 aaKnown RBP13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 RACK1P63244 317 aaKnown RBP13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 ODF4Q2M2E3 257 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 Q6ZPB1 254 aaPredicted RBP13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 OR4F15Q8NGB8 312 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 OR8K3Q8NH51 312 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 SNAPC3Q92966 411 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 TRIM43Q96BQ3 446 aaPredicted RBP13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 MACROD1Q9BQ69 325 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 RBFOX1Q9NWB1 397 aaKnown RBP13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 RASD1Q9Y272 281 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 TRAPPC6AO75865 159 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 UBL3O95164 117 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 WISP3O95389 354 aaPredicted RBP13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 CTSLP07711 333 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 GP2P55259 537 aaKnown RBP13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 ERVK-25P63136 954 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 CCNJQ5T5M9 372 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 C1orf94Q6P1W5 598 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 OPN5Q6U736 354 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 VASH1Q7L8A9 365 aaPredicted RBP13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 NDUFB11Q9NX14 153 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 ZNF225Q9UK10 706 aa13.76□□□□□ -0.21
AP000550.1-201ENST00000420508 A0A1B0GWA3 101 aa13.75□□□□□ -0.21
AP000550.1-201ENST00000420508 ASPDHA6ND91 283 aa13.75□□□□□ -0.21
AP000550.1-201ENST00000420508 K7ESM1 405 aa13.75□□□□□ -0.21
AP000550.1-201ENST00000420508 SYT7O43581 403 aa13.75□□□□□ -0.21
AP000550.1-201ENST00000420508 SC5DO75845 299 aa13.75□□□□□ -0.21
AP000550.1-201ENST00000420508 LIPAP38571 399 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms