RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 RASGEF1BQ0VAM2 473 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 MERTKQ12866 999 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 P2RY6Q15077 328 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 TSC22D1Q15714 1073 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 MAPK14Q16539 360 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 SPANXN4Q5MJ08 99 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 TYW3Q6IPR3 259 aaKnown RBP8.38□□□□□ -1.07
NUP50-205ENST00000419387 ALKBH2Q6NS38 261 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 TNFAIP8L2Q6P589 184 aaPredicted RBP8.38□□□□□ -1.07
NUP50-205ENST00000419387 CLEC9AQ6UXN8 241 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 TMPPEQ6ZT21 453 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 MAVSQ7Z434 540 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 YTHDF3Q7Z739 585 aaKnown RBP8.38□□□□□ -1.07
NUP50-205ENST00000419387 RAB3IL1Q8TBN0 382 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 IGFBPL1Q8WX77 278 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 TMEM234Q8WY98 164 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 HSD17B8Q92506 261 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 ROPN1LQ96C74 230 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 NEURL3Q96EH8 262 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 OR5B2Q96R09 309 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 PAIP2Q9BPZ3 127 aaKnown RBP8.38□□□□□ -1.07
NUP50-205ENST00000419387 USB1Q9BQ65 265 aaKnown RBP8.38□□□□□ -1.07
NUP50-205ENST00000419387 PSD2Q9BQI7 771 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 BDH2Q9BUT1 245 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 GSX2Q9BZM3 304 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 QRSL1Q9H0R6 528 aaKnown RBP8.38□□□□□ -1.07
NUP50-205ENST00000419387 SLCO1B3Q9NPD5 702 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.38□□□□□ -1.07
NUP50-205ENST00000419387 ACER3Q9NUN7 267 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 MARCOQ9UEW3 520 aaPredicted RBP8.38□□□□□ -1.07
NUP50-205ENST00000419387 ING1Q9UK53 422 aaPredicted RBP8.38□□□□□ -1.07
NUP50-205ENST00000419387 SLC35A3Q9Y2D2 325 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 WDR45Q9Y484 360 aa8.38□□□□□ -1.07
NUP50-205ENST00000419387 C9JVG2 144 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 E9PBE3 544 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 HS3ST1O14792 307 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 SMAD9O15198 467 aaKnown RBP8.37□□□□□ -1.07
NUP50-205ENST00000419387 KIAA0513O60268 411 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 CYTIPO60759 359 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 TMCC2O75069 709 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 H6PDO95479 791 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 PAX1P15863 534 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 CHI3L1P36222 383 aaPredicted RBP8.37□□□□□ -1.07
NUP50-205ENST00000419387 OR3A2P47893 321 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 PTH2RP49190 550 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 DIO1P49895 249 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 KHKP50053 298 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 UFM1P61960 85 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 CSNK2A1P68400 391 aaPredicted RBP8.37□□□□□ -1.07
NUP50-205ENST00000419387 KCNJ10P78508 379 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 ITGADQ13349 1161 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 FAM174BQ3ZCQ3 159 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 NCMAPQ5T1S8 102 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 OGFOD2Q6N063 350 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 FRRS1Q6ZNA5 592 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 Q6ZT83 130 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 Q71RC1 249 aaPredicted RBP8.37□□□□□ -1.07
NUP50-205ENST00000419387 SPATA19Q7Z5L4 167 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 ZNF619Q8N2I2 560 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 ZNF611Q8N823 705 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 FAM71CQ8NEG0 241 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 ZNF563Q8TA94 476 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 SLC25A43Q8WUT9 341 aaPredicted RBP8.37□□□□□ -1.07
NUP50-205ENST00000419387 TMEM171Q8WVE6 324 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 CKAP2Q8WWK9 683 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 AKAP1Q92667 903 aaKnown RBP eCLIP8.37□□□□□ -1.07
NUP50-205ENST00000419387 KISS1RQ969F8 398 aaPredicted RBP8.37□□□□□ -1.07
NUP50-205ENST00000419387 ZG16BQ96DA0 208 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 TEX37Q96LM6 180 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 Q96MF0 132 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 CCDC115Q96NT0 180 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 SLC35A5Q9BS91 424 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 NGBQ9NPG2 151 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 THAP1Q9NVV9 213 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 NKIRAS1Q9NYS0 192 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 BTNL2Q9UIR0 455 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 SPIN1Q9Y657 262 aaPredicted RBP8.37□□□□□ -1.07
NUP50-205ENST00000419387 DSCAMO60469 2012 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 HEATR5AQ86XA9 2040 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 ARID1AO14497 2285 aa8.37□□□□□ -1.07
NUP50-205ENST00000419387 RAI1Q7Z5J4 1906 aaPredicted RBP8.37□□□□□ -1.07
NUP50-205ENST00000419387 FLNAP21333 2647 aaKnown RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 PRAMEF27A3QJZ7 478 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 CCDC154A6NI56 674 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 ZNF724A8MTY0 619 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 H7C1Q1 480 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 SULT2B1O00204 365 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 HMGN4O00479 90 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 SDHDO14521 159 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 DYNC1I1O14576 645 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 BCAS1O75363 584 aaPredicted RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 LY6G6DO95868 133 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 HEXAP06865 529 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 ALDOCP09972 364 aaKnown RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 TFPIP10646 304 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 FKBP2P26885 142 aaKnown RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 IL12AP29459 219 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 RYKP34925 604 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 NME5P56597 212 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 TXNL4AP83876 142 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms