RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 NRGNQ92686 78 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 LRRC46Q96FV0 321 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 CPPED1Q9BRF8 314 aaPredicted RBP18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 GPATCH1Q9BRR8 931 aaKnown RBP18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 CCDC134Q9H6E4 229 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 GLRX2Q9NS18 164 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 TESMINQ9Y4I5 508 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 ANKRD17O75179 2603 aaKnown RBP18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 ABCA4P78363 2273 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 A0A1W2PPR1 153 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 GJE1A6NN92 205 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 SIAH2O43255 324 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 SMNDC1O75940 238 aaKnown RBP eCLIP18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 GPX2P18283 190 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 RYKP34925 604 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 CD79BP40259 229 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 APOBEC1P41238 236 aaKnown RBP18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 IDH2P48735 452 aaKnown RBP18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 CRISP3P54108 245 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 TESK1Q15569 626 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 SYT14P1Q58G82 188 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 PDSS1Q5T2R2 415 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 PRAMEF8Q5VWM4 474 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 PRAMEF7Q5VXH5 474 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 GRINAQ7Z429 371 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 COMTD1Q86VU5 262 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 DPP10Q8N608 796 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 TMEM234Q8WY98 164 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 ARL5BQ96KC2 179 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 DACH2Q96NX9 599 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 ADAM19Q9H013 955 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 THUMPD1Q9NXG2 353 aaKnown RBP18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 OSGIN1Q9UJX0 560 aa18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 ZNF443Q9Y2A4 671 aaPredicted RBP18.38■□□□□ 0.53
PKNOX1-202ENST00000418336 FREM1Q5H8C1 2179 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 VPS13CQ709C8 3753 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 IGHV3-15A0A0B4J1V0 119 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 A0A0G2JPF8 293 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 HNRNPCL2B2RXH8 293 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 HNRNPCL3B7ZW38 293 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 HNRNPCL1O60812 293 aaKnown RBP18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 SYNGR4O95473 234 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 THBS1P07996 1170 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 HNRNPCL4P0DMR1 293 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 ARAFP10398 606 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 IL7RP16871 459 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 UGT2B10P36537 528 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 CPOXP36551 454 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 CPA2P48052 419 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 LIN52Q52LA3 116 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 RUNDC3AQ59EK9 446 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 METTL21CQ5VZV1 264 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 FCRLAQ7L513 359 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 NUFIP2Q7Z417 695 aaKnown RBP18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 PSD2Q9BQI7 771 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 TMEM120AQ9BXJ8 343 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 FGFR1OP2Q9NVK5 253 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 ELOVL5Q9NYP7 299 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 CALML5Q9NZT1 146 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 KLHL13Q9P2N7 655 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 CHRNA9Q9UGM1 479 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 PROCRQ9UNN8 238 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 AKAP6Q13023 2319 aa18.37■□□□□ 0.53
PKNOX1-202ENST00000418336 A0A0G2JND7 137 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 FBP2O00757 339 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 PGM3O95394 542 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 PABPC4LP0CB38 370 aaKnown RBP18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 PRG2P13727 222 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 NCF2P19878 526 aaPredicted RBP18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 GUCY1A3Q02108 690 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 SELPLGQ14242 412 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 ABLIM2Q6H8Q1 611 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 TMPPEQ6ZT21 453 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 TUSC5Q8IXB3 177 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 PEX5LQ8IYB4 626 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 PRRG4Q9BZD6 226 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 RABEP2Q9H5N1 569 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 BCO1Q9HAY6 547 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 GP6Q9HCN6 339 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 EMC9Q9Y3B6 208 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 CELSR1Q9NYQ6 3014 aa18.36■□□□□ 0.53
PKNOX1-202ENST00000418336 TMEM72A0PK05 275 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 SH3D21A4FU49 640 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 CFAP73A6NFT4 308 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 ZNF814B7Z6K7 855 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 CYTIPO60759 359 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 HRGP04196 525 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 GKN3PP0CG01 181 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 EDNRAP25101 427 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 SLC1A3P43003 542 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 DIO1P49895 249 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 RNPS1Q15287 305 aaKnown RBP18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 PPP4R4Q6NUP7 873 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 TMEM200AQ86VY9 491 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 ZNF563Q8TA94 476 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 TSPEARQ8WU66 669 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 SLC25A43Q8WUT9 341 aaPredicted RBP18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 WFIKKN1Q96NZ8 548 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 OR5B2Q96R09 309 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 SPATA9Q9BWV2 254 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms