RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PIGFQ07326 219 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 SLC3A1Q07837 685 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 ELP6Q0PNE2 266 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 GAGE1Q13065 139 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 ASAH1Q13510 395 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 SNTB1Q13884 538 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 EFR3AQ14156 821 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 ACOX1Q15067 660 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 MAJINQ3KP22 176 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 TMEM52BQ4KMG9 183 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 Q5BKY6 102 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 CARD16Q5EG05 197 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 NHSL2Q5HYW2 709 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 RBM48Q5RL73 367 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 PDZK1Q5T2W1 519 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 GPR139Q6DWJ6 353 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 TMEM211Q6ICI0 200 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 KLHL24Q6TFL4 600 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 Q6ZRM9 215 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 RFX8Q6ZV50 586 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 RRAGAQ7L523 313 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 HSD17B13Q7Z5P4 300 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 POLNQ7Z5Q5 900 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 MRPL52Q86TS9 123 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 ISCA2Q86U28 154 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 PIGZQ86VD9 579 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 COMMD7Q86VX2 200 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 LRRC56Q8IYG6 542 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 C4orf33Q8N1A6 199 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 SVOPLQ8N434 492 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 C3orf56Q8N813 242 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 GDPD1Q8N9F7 314 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 DCAF4L2Q8NA75 395 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 SLC38A9Q8NBW4 561 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 OR5T1Q8NG75 326 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 OR56A1Q8NGH5 318 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 SFT2D1Q8WV19 159 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 DCAKDQ8WVC6 231 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 CPT1BQ92523 772 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 PIGTQ969N2 578 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 DCLRE1CQ96SD1 692 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 FAM118BQ9BPY3 351 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 ZSWIM1Q9BR11 485 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 CBWD1Q9BRT8 395 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 SSBP3Q9BWW4 388 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 BEX2Q9BXY8 128 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 TEX101Q9BY14 249 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 ROGDIQ9GZN7 287 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 NMUR2Q9GZQ4 415 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 NXF2Q9GZY0 626 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 LHPPQ9H008 270 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 DSN1Q9H410 356 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 CYP3A43Q9HB55 503 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 LRRC4Q9HBW1 653 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 HEYLQ9NQ87 328 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 TAS2R9Q9NYW1 312 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 LPAR3Q9UBY5 353 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 FBXL4Q9UKA2 621 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 DLGAP4Q9Y2H0 992 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 V9GYQ6 96 aa5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 MDC1Q14676 2089 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-206ENST00000417628 A0A0B4J293 547 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 A0A1W2PN81 502 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 hCG_1807616A0A1W2PRN6 198 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 SYNDIG1LA6NDD5 238 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 CCDC182A6NF36 153 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 MBD3L5A6NJ08 208 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 KDM4EB2RXH2 506 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 H0YAE9 185 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 J3KRW8 73 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 PPP6CO00743 305 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 CD3EAPO15446 510 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 TXNL1O43396 289 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 GPRIN2O60269 458 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 ZNF821O75541 412 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC22A3O75751 556 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 KLF7O75840 302 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 BCAS2O75934 225 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 GOSR1O95249 250 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 PLATP00750 562 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 ITGA5P08648 1049 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 OR4E1P0C645 316 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 EBLN1P0CF75 366 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 FOLR2P14207 255 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 TCF4P15884 667 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 TPH1P17752 444 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 XRCC1P18887 633 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 MSH3P20585 1137 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 C4BPBP20851 252 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 CASP1P29466 404 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 GKP32189 559 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 PCGF2P35227 344 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 CHRNA7P36544 502 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 FEN1P39748 380 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 CAPGP40121 348 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 GRIA3P42263 894 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 RPL35P42766 123 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 RPL21P46778 160 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 CPA2P48052 419 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 AKR1D1P51857 326 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms