RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 GGT1P19440 569 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 PGCP20142 388 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 PTNP21246 168 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 MAPK14Q16539 360 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 SYT14P1Q58G82 188 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 ABLIM2Q6H8Q1 611 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 OR4F3Q6IEY1 312 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 SSX8Q7RTT4 187 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 MTDHQ86UE4 582 aaKnown RBP13.08□□□□□ -0.32
RPS28-201ENST00000417088 P2RY8Q86VZ1 359 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 ZNF100Q8IYN0 542 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 ZNF433Q8N7K0 673 aaPredicted RBP13.08□□□□□ -0.32
RPS28-201ENST00000417088 TMEM234Q8WY98 164 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 SLC35G5Q96KT7 338 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 HS6ST2Q96MM7 605 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 OR51I1Q9H343 314 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 ALG2Q9H553 416 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 ASIC5Q9NY37 505 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 LGALS13Q9UHV8 139 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 MXRA5Q9NR99 2828 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 IGKV3D-15A0A087WSY6 115 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 GOLGA8QA0A0J9YX86 632 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 GOLGA8OA6NCC3 632 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 GOLGA8NF8WBI6 632 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 SULT2B1O00204 365 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 RNASET2O00584 256 aaKnown RBP13.07□□□□□ -0.32
RPS28-201ENST00000417088 ABCD4O14678 606 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 CD5LO43866 347 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 BCAS1O75363 584 aaPredicted RBP13.07□□□□□ -0.32
RPS28-201ENST00000417088 IGHV3-9P01782 118 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 TP53P04637 393 aaPredicted RBP13.07□□□□□ -0.32
RPS28-201ENST00000417088 BPGMP07738 259 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 NUDT17P0C025 328 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 CREB1P16220 341 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 PGM1P36871 562 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 CASP9P55211 416 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 CDH11P55287 796 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 CSNK2A1P68400 391 aaPredicted RBP13.07□□□□□ -0.32
RPS28-201ENST00000417088 MAD2L1Q13257 205 aaPredicted RBP13.07□□□□□ -0.32
RPS28-201ENST00000417088 PDK3Q15120 406 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 FBXW9Q5XUX1 488 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 EIF3MQ7L2H7 374 aaKnown RBP13.07□□□□□ -0.32
RPS28-201ENST00000417088 C16orf62Q7Z3J2 963 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 FAM71CQ8NEG0 241 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 MIPOL1Q8TD10 442 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 SLC25A43Q8WUT9 341 aaPredicted RBP13.07□□□□□ -0.32
RPS28-201ENST00000417088 BARX1Q9HBU1 254 aaPredicted RBP13.07□□□□□ -0.32
RPS28-201ENST00000417088 CTPS2Q9NRF8 586 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 EXD2Q9NVH0 621 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 NOP53Q9NZM5 478 aaKnown RBP13.07□□□□□ -0.32
RPS28-201ENST00000417088 B3GALT5Q9Y2C3 310 aa13.07□□□□□ -0.32
RPS28-201ENST00000417088 ZNF716A6NP11 495 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 TLX2O43763 284 aaPredicted RBP13.06□□□□□ -0.32
RPS28-201ENST00000417088 SSX4O60224 188 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 KIAA0513O60268 411 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 SCN2BO60939 215 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 OR12D1P0DN82 309 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 TFPIP10646 304 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 NTF4P34130 210 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 APOBEC1P41238 236 aaKnown RBP13.06□□□□□ -0.32
RPS28-201ENST00000417088 SMU1Q2TAY7 513 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 AGAP6Q5VW22 663 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 AP1ARQ63HQ0 302 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 OR4A15Q8NGL6 344 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 RAB8BQ92930 207 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 RADILQ96JH8 1075 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 ARL5BQ96KC2 179 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 CCDC106Q9BWC9 280 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 YAE1D1Q9NRH1 226 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 FAIMQ9NVQ4 179 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 EMC3Q9P0I2 261 aa13.06□□□□□ -0.32
RPS28-201ENST00000417088 NOSIPQ9Y314 301 aaKnown RBP13.06□□□□□ -0.32
RPS28-201ENST00000417088 E7EQL1 145 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 ITM2AO43736 263 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 TYROBPO43914 113 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 RAD51DO75771 328 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 AGR2O95994 175 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 GUSBP08236 651 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 RYKP34925 604 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 ETV4P43268 484 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 ZNF83P51522 516 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 PHC1P78364 1004 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 PLAURQ03405 335 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 FUT5Q11128 374 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 NRF1Q16656 503 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 TYW3Q6IPR3 259 aaKnown RBP13.05□□□□□ -0.32
RPS28-201ENST00000417088 C11orf71Q6IPW1 123 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 TNFAIP8L2Q6P589 184 aaPredicted RBP13.05□□□□□ -0.32
RPS28-201ENST00000417088 HIPK1Q86Z02 1210 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 UBE2J2Q8N2K1 259 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 PIAS4Q8N2W9 510 aaPredicted RBP13.05□□□□□ -0.32
RPS28-201ENST00000417088 OR8J2Q8NGG1 315 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 OR52N5Q8NH56 324 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 ZNF563Q8TA94 476 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 XAGE5Q8WWM1 108 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 OIT3Q8WWZ8 545 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 APH1AQ96BI3 265 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 ZG16BQ96DA0 208 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 DNAJA3Q96EY1 480 aa13.05□□□□□ -0.32
RPS28-201ENST00000417088 PPP1R36Q96LQ0 422 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms