RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 CLUP10909 449 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 UBL4AP11441 157 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 PSMA1P25786 263 aaKnown RBP12.36□□□□□ -0.43
PTPN6-203ENST00000416215 SLC1A3P43003 542 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 ITGADQ13349 1161 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 SQSTM1Q13501 440 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 ZNF846Q147U1 533 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 TIMM50Q3ZCQ8 353 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 KLHL12Q53G59 568 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 RPL13AP3Q6NVV1 102 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 C1orf210Q8IVY1 113 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 SIRT6Q8N6T7 355 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 ZFP41Q8N8Y5 198 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 ZNF527Q8NB42 609 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 FAM71CQ8NEG0 241 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 KBTBD8Q8NFY9 601 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 OR4D9Q8NGE8 314 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 OR51G2Q8NGK0 314 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 OR1N1Q8NGS0 311 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 SECISBP2Q96T21 854 aaKnown RBP12.36□□□□□ -0.43
PTPN6-203ENST00000416215 ZNF649Q9BS31 505 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 HOXD1Q9GZZ0 328 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 RACGAP1Q9H0H5 632 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 NDUFB11Q9NX14 153 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 FBXL4Q9UKA2 621 aa12.36□□□□□ -0.43
PTPN6-203ENST00000416215 EXOGQ9Y2C4 368 aaKnown RBP12.36□□□□□ -0.43
PTPN6-203ENST00000416215 YARS2Q9Y2Z4 477 aaKnown RBP12.36□□□□□ -0.43
PTPN6-203ENST00000416215 TMEM129A0AVI4 362 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 LALBAP00709 142 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 NOS3P29474 1203 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 GPR143P51810 404 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 ACY1Q03154 408 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 SKP2Q13309 424 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 INAQ16352 499 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 GXYLT1Q4G148 440 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 PRPF38BQ5VTL8 546 aaKnown RBP12.35□□□□□ -0.43
PTPN6-203ENST00000416215 HLA-DQA1Q5Y7H0 255 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 NIPAL3Q6P499 406 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 RTL4Q6ZR62 310 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 SNX29P2Q8IUI4 249 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 SLC37A3Q8NCC5 494 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 OR14A16Q8NHC5 309 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 DNAJA4Q8WW22 397 aaPredicted RBP12.35□□□□□ -0.43
PTPN6-203ENST00000416215 CCDC74BQ96LY2 380 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 C6orf62Q9GZU0 229 aaPredicted RBP12.35□□□□□ -0.43
PTPN6-203ENST00000416215 WWTR1Q9GZV5 400 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 OR51V1Q9H2C8 321 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 APMAPQ9HDC9 416 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 HMG20AQ9NP66 347 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 CMC2Q9NRP2 79 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 SRPK3Q9UPE1 567 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 EXOSC1Q9Y3B2 195 aaKnown RBP12.35□□□□□ -0.43
PTPN6-203ENST00000416215 FAM86C2PA6NEL3 165 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 MAGEB3O15480 346 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 ZNF264O43296 627 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 CPEP16870 476 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 ENDOUP21128 410 aaKnown RBP12.35□□□□□ -0.43
PTPN6-203ENST00000416215 ADH7P40394 386 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 SIGLEC14Q08ET2 396 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 TMEM44Q2T9K0 475 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 MEPCEQ7L2J0 689 aaKnown RBP12.35□□□□□ -0.43
PTPN6-203ENST00000416215 MFSD4AQ8N468 514 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 FAM181AQ8N9Y4 354 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 ZNF485Q8NCK3 441 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 PLPP5Q8NEB5 264 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 OR5M3Q8NGP4 307 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 FNDC8Q8TC99 324 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 SGTBQ96EQ0 304 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 TNFRSF10DQ9UBN6 386 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 COPS7AQ9UBW8 275 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 SEC14L4Q9UDX3 406 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 ICAM5Q9UMF0 924 aa12.35□□□□□ -0.43
PTPN6-203ENST00000416215 PRR23D1E9PI22 279 aaPredicted RBP12.34□□□□□ -0.43
PTPN6-203ENST00000416215 GDF9O60383 454 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 SCRG1O75711 98 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 TSPAN19P0C672 248 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 ANKRD34CP0C6C1 535 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 PRR23D2P0DMB1 279 aaPredicted RBP12.34□□□□□ -0.43
PTPN6-203ENST00000416215 MST1P26927 711 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 SLC16A1P53985 500 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 CRMP1Q14194 572 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 ZNF791Q3KP31 576 aaPredicted RBP12.34□□□□□ -0.43
PTPN6-203ENST00000416215 NKAIN1Q4KMZ8 207 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 C16orf47Q6ZP98 133 aaPredicted RBP12.34□□□□□ -0.43
PTPN6-203ENST00000416215 LINC00299Q6ZSB3 139 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 RABEPKQ7Z6M1 372 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 MARCH3Q86UD3 253 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 SLITRK4Q8IW52 837 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 TBX5Q99593 518 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 ARHGAP9Q9BRR9 750 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 ASPNQ9BXN1 380 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 MMP27Q9H306 513 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 FN3KQ9H479 309 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 ERVK13-1Q9NX77 482 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 MRTO4Q9UKD2 239 aaKnown RBP12.34□□□□□ -0.43
PTPN6-203ENST00000416215 STUB1Q9UNE7 303 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 NCOR1O75376 2440 aa12.34□□□□□ -0.43
PTPN6-203ENST00000416215 IGKV1D-42A0A075B6H8 117 aa12.33□□□□□ -0.43
PTPN6-203ENST00000416215 IGHA1P01876 353 aa12.33□□□□□ -0.43
PTPN6-203ENST00000416215 GYPBP06028 91 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms