RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 TMEM204Q9BSN7 226 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 NGBQ9NPG2 151 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 ING1Q9UK53 422 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 LIPT1Q9Y234 373 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 TMEM120BA0PK00 339 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 PRAMEF27A3QJZ7 478 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 CCDC154A6NI56 674 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 FAM171A2A8MVW0 826 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 ZNF814B7Z6K7 855 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 SLCO1B7G3V0H7 640 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 SULT2B1O00204 365 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 HMGN4O00479 90 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 SMAD9O15198 467 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 HDAC3O15379 428 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 PLAUP00749 431 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 PGRP06401 933 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 HOXB4P17483 251 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 OR3A2P47893 321 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 DIO1P49895 249 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 CHRNEQ04844 493 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 TSC22D1Q15714 1073 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 ATG16L1Q676U5 607 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 ZNF621Q6ZSS3 439 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 Q6ZT83 130 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 YTHDF3Q7Z739 585 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 RNF130Q86XS8 419 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 ARFGAP2Q8N6H7 521 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 ZNF611Q8N823 705 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 TMEM171Q8WVE6 324 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 ZG16BQ96DA0 208 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 PERPQ96FX8 193 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 TRNT1Q96Q11 434 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 OR52E6Q96RD3 313 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 ZBTB18Q99592 522 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 BDH2Q9BUT1 245 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 CCDC106Q9BWC9 280 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 GSX2Q9BZM3 304 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 EXOSC3Q9NQT5 275 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 GPR45Q9Y5Y3 372 aa15.61■□□□□ 0.09
PDLIM2-208ENST00000416159 HS3ST1O14792 307 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 SNNO75324 88 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 TFPIP10646 304 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 EPHA3P29320 983 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 IL12AP29459 219 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 RYKP34925 604 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 CLK1P49759 484 aaKnown RBP15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 SLC18A1P54219 525 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 PDK3Q15120 406 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 TAB1Q15750 504 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 ALKBH2Q6NS38 261 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 LRRC74BQ6ZQY2 392 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 BHLHA15Q7RTS1 189 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 GRINAQ7Z429 371 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 GALNT5Q7Z7M9 940 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 MTDHQ86UE4 582 aaKnown RBP15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 CMIPQ8IY22 773 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 GLB1L3Q8NCI6 653 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 RAB3IL1Q8TBN0 382 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 IGFBPL1Q8WX77 278 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 PMM1Q92871 262 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 ZHX1-C8orf76Q96EF9 292 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 Q96MF0 132 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 ZNF300Q96RE9 604 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 CXorf56Q9H5V9 222 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 WDR55Q9H6Y2 383 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 CTPS2Q9NRF8 586 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 CHRNA9Q9UGM1 479 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 HDGFL3Q9Y3E1 203 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 USF3Q68DE3 2245 aa15.6■□□□□ 0.09
PDLIM2-208ENST00000416159 GOLGA8QA0A0J9YX86 632 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 GOLGA8OA6NCC3 632 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 C9JVG2 144 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 GOLGA8NF8WBI6 632 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 BCAS1O75363 584 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 CNOT4O95628 575 aaKnown RBP15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 FESP07332 822 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 KITP10721 976 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 PAX1P15863 534 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 HTR3AP46098 478 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 PTH2RP49190 550 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 SYPL1Q16563 259 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 NCMAPQ5T1S8 102 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 ADAM5Q6NVV9 412 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 ZNF100Q8IYN0 542 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 ANKFN1Q8N957 763 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 MGARPQ8TDB4 240 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 AKAP1Q92667 903 aaKnown RBP eCLIP15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 ZNF75CPQ92670 426 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 ZNF775Q96BV0 537 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 SMR3AQ99954 134 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 INPP5KQ9BT40 448 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 POTEKPQ9BYX7 375 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 SLC38A1Q9H2H9 487 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 ESRP2Q9H6T0 727 aaKnown RBP15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 MTHFD2LQ9H903 347 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 EMC3Q9P0I2 261 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 PRSS50Q9UI38 385 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 RNF115Q9Y4L5 304 aa15.59■□□□□ 0.09
PDLIM2-208ENST00000416159 AGAP5A6NIR3 686 aa15.58■□□□□ 0.08
PDLIM2-208ENST00000416159 DNPH1O43598 174 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms