RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 ZNF426Q9BUY5 554 aa12.99□□□□□ -0.33
HMGA1P1-201ENST00000415560 YTHDF1Q9BYJ9 559 aaKnown RBP12.99□□□□□ -0.33
HMGA1P1-201ENST00000415560 NDRG4Q9ULP0 352 aaKnown RBP12.99□□□□□ -0.33
HMGA1P1-201ENST00000415560 MSRB2Q9Y3D2 182 aa12.99□□□□□ -0.33
HMGA1P1-201ENST00000415560 A0A087WZY1 265 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 EFCAB9A8MZ26 197 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 KPNA4O00629 521 aaPredicted RBP12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 MPZL2O60487 215 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 SAGP10523 405 aaPredicted RBP12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 BMP7P18075 431 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 CNR1P21554 472 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 CHMP24386 653 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 GGT2P36268 569 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 POLR2IP36954 125 aaKnown RBP12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 SLC9A3P48764 834 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 CHN2P52757 468 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 IL5RAQ01344 420 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 CRYZQ08257 329 aaKnown RBP12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 TOP3AQ13472 1001 aaPredicted RBP12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 PTGES3Q15185 160 aaKnown RBP12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 PRAMEF20Q5VT98 475 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 ZNF691Q5VV52 312 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 BICRALQ6AI39 1079 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 OR5M10Q6IEU7 315 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 ISLR2Q6UXK2 745 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 CLDN22Q8N7P3 220 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 TEX47Q8TBZ9 253 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 OSTF1Q92882 214 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 SGTBQ96EQ0 304 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 TMEM41AQ96HV5 264 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 PITX2Q99697 317 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 PRRG3Q9BZD7 231 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 SH2D2AQ9NP31 389 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 SERINC1Q9NRX5 453 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 LRFN1Q9P244 771 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 REV1Q9UBZ9 1251 aa12.98□□□□□ -0.33
HMGA1P1-201ENST00000415560 RIF1Q5UIP0 2472 aaKnown RBP12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 TMED7-TICAM2A0A0A6YYA0 188 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 GNB5O14775 395 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 PIP5K1CO60331 668 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 HCN1O60741 890 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 CBR3O75828 277 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 TNFAIP8O95379 198 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 CCL3P10147 92 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 PRKAR1AP10644 381 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 FKBP2P26885 142 aaKnown RBP12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 EIF1P41567 113 aaKnown RBP12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 GPR4P46093 362 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 SMSP52788 366 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 CDC20Q12834 499 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 TOMM34Q15785 309 aaPredicted RBP12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 CASP12Q6UXS9 341 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 WDR88Q6ZMY6 472 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 SLC43A2Q8N370 569 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 OR2M3Q8NG83 312 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 PFN4Q8NHR9 129 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 STK35Q8TDR2 534 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 MRGPRX4Q96LA9 322 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 NDEL1Q9GZM8 345 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 IMPAD1Q9NX62 359 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 OSGIN1Q9UJX0 560 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 TMED7Q9Y3B3 224 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 SPIN1Q9Y657 262 aaPredicted RBP12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 ZNF292O60281 2723 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 PCSK5Q92824 1860 aa12.97□□□□□ -0.33
HMGA1P1-201ENST00000415560 ENO4A6NNW6 628 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 ZAR1LA6NP61 321 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 A8MVM7 634 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 ADAM10O14672 748 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 SNPHO15079 494 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 KLK10O43240 276 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 CLIC3O95833 236 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 HIST1H2ABP04908 130 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 GNAO1P09471 354 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 PRKCAP17252 672 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 ADH6P28332 368 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 CD96P40200 585 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 GIPRP48546 466 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 DLX5P56178 289 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 DSCR4P56555 118 aaPredicted RBP12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 CSNK2BP67870 215 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 RAPSNQ13702 412 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 TUBA3CQ13748 450 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 ANKDD1AQ495B1 522 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 ATP1A1-AS1Q5TC04 95 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 ZNF468Q5VIY5 522 aaPredicted RBP12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 TUBA3EQ6PEY2 450 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 UGT2A3Q6UWM9 527 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 HIST3H2AQ7L7L0 130 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 OAFQ86UD1 273 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 C10orf53Q8N6V4 93 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 FADS6Q8N9I5 356 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 PSD4Q8NDX1 1056 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 OR52L1Q8NGH7 329 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 TRUB1Q8WWH5 349 aaKnown RBP12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 HIST1H2ACQ93077 130 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 ZBTB8AQ96BR9 441 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 JSRP1Q96MG2 331 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms