RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GDI2P50395 445 aaKnown RBP16.3■□□□□ 0.2
SDCBP-202ENST00000413219 GBX2P52951 348 aaPredicted RBP16.3■□□□□ 0.2
SDCBP-202ENST00000413219 ACTA2P62736 377 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 ACTG2P63267 376 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 NTHL1P78549 312 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 CRMP1Q14194 572 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 OPCMLQ14982 345 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 DUSP5Q16690 384 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 AMZ1Q400G9 498 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 PXDC1Q5TGL8 231 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 RTL10Q7L3V2 364 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 OR6V1Q8N148 313 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 ZNF619Q8N2I2 560 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 OR2L3Q8NG85 312 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 OR13C2Q8NGS9 318 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 C6orf106Q9H6K1 298 aaPredicted RBP16.3■□□□□ 0.2
SDCBP-202ENST00000413219 AUNIPQ9H7T9 357 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 HRASLSQ9HDD0 168 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 NRIP3Q9NQ35 241 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 FBXL3Q9UKT7 428 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 MED31Q9Y3C7 131 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 A0A0B4J203 849 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 hCG_1807616A0A1W2PRN6 198 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 C1QTNF3-AMACRE9PGA6 284 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 ATP1B1P05026 303 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 NID1P14543 1247 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 CTRB1P17538 263 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 CLDN2P57739 230 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 TSPAN5P62079 268 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 ZSWIM7Q19AV6 140 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 TCEAL5Q5H9L2 206 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 NHLRC3Q5JS37 347 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 TCTE1Q5JU00 501 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 CTRB2Q6GPI1 263 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 MTSS1LQ765P7 747 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 PRSS45Q7RTY3 260 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 GRAMD2AQ8IUY3 354 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 ETFBKMTQ8IXQ9 262 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 ZNF671Q8TAW3 534 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 LGALS14Q8TCE9 139 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 ARPC5LQ9BPX5 153 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 TEX101Q9BY14 249 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 RDH8Q9NYR8 311 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 ABT1Q9ULW3 272 aaKnown RBP16.3■□□□□ 0.2
SDCBP-202ENST00000413219 MDC1Q14676 2089 aaKnown RBP16.29■□□□□ 0.2
SDCBP-202ENST00000413219 LTBP2Q14767 1821 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 CENPVL1A0A0U1RR11 272 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 GABARAPH6UMI1 98 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 IFNGP01579 166 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 GIPP09681 153 aaPredicted RBP16.29■□□□□ 0.2
SDCBP-202ENST00000413219 CPN1P15169 458 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 ZP3P21754 424 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 UNQ9370/PRO34162Q6UXP9 181 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 ESPNLQ6ZVH7 1005 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 SSX6Q7RTT6 188 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 CMTM4Q8IZR5 234 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.29■□□□□ 0.2
SDCBP-202ENST00000413219 GAL3ST3Q96A11 431 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 ARMC5Q96C12 935 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 WBP1Q96G27 269 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 PEX11GQ96HA9 241 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 LRFN5Q96NI6 719 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 TMPRSS13Q9BYE2 586 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 LIN7BQ9HAP6 207 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 C14orf105Q9NVL8 296 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 OR6C2Q9NZP2 312 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 FBXL21Q9UKT6 434 aa16.29■□□□□ 0.2
SDCBP-202ENST00000413219 PRRC2BQ5JSZ5 2229 aaKnown RBP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 SULT1B1O43704 296 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 GNRH1P01148 92 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 TFP02787 698 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 CLUP10909 449 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 LAMP2P13473 410 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 NAGAP17050 411 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 CMPK1P30085 196 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 MAT2AP31153 395 aaKnown RBP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 BTN3A2P78410 334 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 MESP2Q0VG99 397 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 GPR68Q15743 365 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 MRPL2Q5T653 305 aaKnown RBP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 ARHGAP11AQ6P4F7 1023 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 RPL22L1Q6P5R6 122 aaKnown RBP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 Q6ZTK2 550 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 KCTD20Q7Z5Y7 419 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 IQCF2Q8IXL9 164 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 OR52E1Q8NGJ3 308 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 PELI1Q96FA3 418 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 ZNF578Q96N58 590 aaPredicted RBP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 DDOQ99489 341 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 UTP23Q9BRU9 249 aaKnown RBP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 TIMM29Q9BSF4 260 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 EVA1AQ9H8M9 152 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 NKIRAS2Q9NYR9 191 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 HCN3Q9P1Z3 774 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 PCDH10Q9P2E7 1040 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 RCE1Q9Y256 329 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 MUC22E2RYF6 1773 aaPredicted RBP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 MYO10Q9HD67 2058 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 PLSCR5A0PG75 271 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 ZNF879B4DU55 563 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms