RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 DNAJC13O75165 2243 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 ZNF407Q9C0G0 2248 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 BSNQ9UPA5 3926 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 A0A087WUJ7 227 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 CPSF4LA6NMK7 179 aaKnown RBP13.75□□□□□ -0.21
LSM5-207ENST00000410044 NPIPA5E9PKD4 350 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 J3KTA2 159 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 AQP7O14520 342 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 CHP2O43745 196 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 PNMTP11086 282 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 IFNA8P32881 189 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 HMGA2P52926 109 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 CDH12P55289 794 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 TAS2R41P59536 307 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 RAC1P63000 192 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 ST3GAL3Q11203 375 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 MERTKQ12866 999 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 NFATC3Q12968 1075 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 BCL2A1Q16548 175 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 VASNQ6EMK4 673 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 AAGABQ6PD74 315 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 GDF7Q7Z4P5 450 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 CYP4Z1Q86W10 505 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 OFCC1Q8IZS5 231 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 CADM2Q8N3J6 435 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 SLC41A3Q96GZ6 507 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 RSRC1Q96IZ7 334 aaKnown RBP13.75□□□□□ -0.21
LSM5-207ENST00000410044 MPP4Q96JB8 637 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 BBC3Q96PG8 261 aaPredicted RBP13.75□□□□□ -0.21
LSM5-207ENST00000410044 PRSS27Q9BQR3 290 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 ANKRD19PQ9H560 264 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 YY1AP1Q9H869 796 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 CTPS2Q9NRF8 586 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 SERINC1Q9NRX5 453 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 ASF1BQ9NVP2 202 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 NPIPA1Q9UND3 350 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 AURKCQ9UQB9 309 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 RPH3AQ9Y2J0 694 aaPredicted RBP13.75□□□□□ -0.21
LSM5-207ENST00000410044 ZNF337Q9Y3M9 751 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 AP4B1Q9Y6B7 739 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 TLN1Q9Y490 2541 aaKnown RBP13.75□□□□□ -0.21
LSM5-207ENST00000410044 GTF3C1Q12789 2109 aa13.75□□□□□ -0.21
LSM5-207ENST00000410044 NBEAQ8NFP9 2946 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 EPG5Q9HCE0 2579 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 TMED7-TICAM2A0A0A6YYA0 188 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 TTLL8A6PVC2 850 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 hCG_2039718K7EN88 272 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 ZNF208O43345 1280 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 FKBP6O75344 327 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 BMP7P18075 431 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 CLK1P49759 484 aaKnown RBP13.74□□□□□ -0.21
LSM5-207ENST00000410044 ALG10BQ5I7T1 473 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 RAET1LQ5VY80 246 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 ZFP1Q6P2D0 407 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 SFXN2Q96NB2 322 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 PIP5K1AQ99755 562 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 ZNF426Q9BUY5 554 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 SLC6A15Q9H2J7 730 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 LDAHQ9H6V9 325 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 NMNAT1Q9HAN9 279 aaPredicted RBP13.74□□□□□ -0.21
LSM5-207ENST00000410044 STOML1Q9UBI4 398 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 TMED7Q9Y3B3 224 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 AP4S1Q9Y587 144 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 LIPGQ9Y5X9 500 aa13.74□□□□□ -0.21
LSM5-207ENST00000410044 KMT2BQ9UMN6 2715 aaPredicted RBP13.74□□□□□ -0.21
LSM5-207ENST00000410044 A0A1W2PRQ8 180 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 OR14I1A6ND48 311 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 SHISA8B8ZZ34 492 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 HNRNPRO43390 633 aaKnown RBP13.73□□□□□ -0.21
LSM5-207ENST00000410044 NPIPB7O75200 414 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 KRT36O76013 467 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 PEPDP12955 493 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 CPN1P15169 458 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 CXCR1P25024 350 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 GCKP35557 465 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 YAP1P46937 504 aaKnown RBP13.73□□□□□ -0.21
LSM5-207ENST00000410044 SMIM11AP58511 58 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 CRYZQ08257 329 aaKnown RBP13.73□□□□□ -0.21
LSM5-207ENST00000410044 SELENBP1Q13228 472 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 DGCR6Q14129 220 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.73□□□□□ -0.21
LSM5-207ENST00000410044 COLEC12Q5KU26 742 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 ARHGAP11AQ6P4F7 1023 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 CHERPQ8IWX8 916 aaKnown RBP13.73□□□□□ -0.21
LSM5-207ENST00000410044 GHDCQ8N2G8 530 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 OR5M1Q8NGP8 315 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 STK35Q8TDR2 534 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 SLC25A43Q8WUT9 341 aaPredicted RBP13.73□□□□□ -0.21
LSM5-207ENST00000410044 ABTB1Q969K4 478 aaPredicted RBP13.73□□□□□ -0.21
LSM5-207ENST00000410044 HS6ST2Q96MM7 605 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 FNDC11Q9BVV2 318 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 MAN2C1Q9NTJ4 1040 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 SELENONQ9NZV5 590 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 CHRNA9Q9UGM1 479 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 SLC7A7Q9UM01 511 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 SLC6A5Q9Y345 797 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 BOD1L1Q8NFC6 3051 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 COL6A6A6NMZ7 2263 aa13.73□□□□□ -0.21
LSM5-207ENST00000410044 MED12Q93074 2177 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 MPDZO75970 2070 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms