RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 DOK3Q7L591 496 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 PRSS45Q7RTY3 260 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 PRSS48Q7RTY5 328 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 SNX20Q7Z614 316 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 DTX1Q86Y01 620 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ZDHHC21Q8IVQ6 265 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 AQP12AQ8IXF9 295 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 MICU2Q8IYU8 434 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 NAGSQ8N159 534 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CADM2Q8N3J6 435 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CLDN19Q8N6F1 224 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 PACRGLQ8N7B6 248 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 SRFBP1Q8NEF9 429 aaKnown RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 OR5T2Q8NGG2 359 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 OR4D10Q8NGI6 311 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 OR8J1Q8NGP2 316 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 HUS1BQ8NHY5 278 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 POC1BQ8TC44 478 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ZFAND1Q8TCF1 268 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 MAPK15Q8TD08 544 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 LKAAEAR1Q8TD35 194 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 SLC37A2Q8TED4 501 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 PHF10Q8WUB8 498 aaKnown RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 DNAJA4Q8WW22 397 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ST8SIA2Q92186 375 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 GTF3AQ92664 365 aaKnown RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 RIT1Q92963 219 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ULK4Q96C45 1275 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 NXPE2Q96DL1 559 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 DUS3LQ96G46 650 aaKnown RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CDKN2AIPNLQ96HQ2 116 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ST6GAL2Q96JF0 529 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 SLC41A2Q96JW4 573 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 COPS8Q99627 209 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 NRTNQ99748 197 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CCDC3Q9BQI4 270 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 DPCDQ9BVM2 203 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 C1QTNF5Q9BXJ0 243 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 BCL2L14Q9BZR8 327 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 IL22Q9GZX6 179 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 KCNK15Q9H427 330 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CDCP1Q9H5V8 836 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 EXO5Q9H790 373 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 NIPAL2Q9H841 368 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 KLHL1Q9NR64 748 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 TREX1Q9NSU2 369 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 C20orf96Q9NUD7 363 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 PAK1IP1Q9NWT1 392 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 BFARQ9NZS9 450 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 SLC17A6Q9P2U8 582 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CHRNA9Q9UGM1 479 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 SERTAD3Q9UJW9 196 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 SNX24Q9Y343 169 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 FAM96BQ9Y3D0 163 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 A3GALT2U3KPV4 340 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CHD8Q9HCK8 2581 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ASXL3Q9C0F0 2248 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 IGLV3-16A0A075B6K0 115 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 A0A1W2PRG6 482 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 PCP4L1A6NKN8 68 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 IQCF5A8MTL0 148 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 LINC00587B1AMM8 73 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 B5MCH6 92 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 HRKO00198 91 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 LGALS8O00214 317 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 WRBO00258 174 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 PPP6CO00743 305 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 TM9SF1O15321 606 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 PSPNO60542 156 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 TBX19O60806 448 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 B4GALT2O60909 372 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 DNAJB6O75190 326 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF780AO75290 641 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 TRIM3O75382 744 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 POP7O75817 140 aaKnown RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 CCNKO75909 580 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 VAPBO95292 243 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 RPLP0P05388 317 aaKnown RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 F3P13726 295 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 ATP1B2P14415 290 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 IGFBP2P18065 325 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 ERP29P30040 261 aaKnown RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 HTR2BP41595 481 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 RPS5P46782 204 aaKnown RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 YAP1P46937 504 aaKnown RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 SLC6A12P48065 614 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 PRLHRP49683 370 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 MEOX2P50222 304 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 HTR6P50406 440 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 PDX1P52945 283 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 MLLT10P55197 1068 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 EEFSECP57772 596 aaKnown RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 OR1D5P58170 312 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 RAB4BP61018 213 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 CSNK2BP67870 215 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 SIRPAP78324 504 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 CCL7P80098 99 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 ABATP80404 500 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 SHC2P98077 582 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms