RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 HSMCR30P0CW71 290 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 NPIPA8P0DM63 369 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 FBLP22087 321 aaKnown RBP6.89□□□□□ -1.31
CXCR4-202ENST00000409817 HTR1FP30939 366 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 SOX6P35712 828 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 SEPHS1P49903 392 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 PGDP52209 483 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 CDH11P55287 796 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 WNT4P56705 351 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 SLC37A1P57057 533 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 COPZ1P61923 177 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 LSM3P62310 102 aaKnown RBP6.89□□□□□ -1.31
CXCR4-202ENST00000409817 ACY1Q03154 408 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 CFHR1Q03591 330 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 ERV3-1Q14264 604 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 CLPPQ16740 277 aaPredicted RBP6.89□□□□□ -1.31
CXCR4-202ENST00000409817 TSTQ16762 297 aaKnown RBP6.89□□□□□ -1.31
CXCR4-202ENST00000409817 ZNF404Q494X3 552 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 ALG10BQ5I7T1 473 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 SLC30A6Q6NXT4 461 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 TUBA3EQ6PEY2 450 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 SMARCD3Q6STE5 483 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 RABEPKQ7Z6M1 372 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 ZAR1Q86SH2 424 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 TMEM151BQ8IW70 566 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 SHISA5Q8N114 240 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 ZNF614Q8N883 585 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 FAM181AQ8N9Y4 354 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 PSD4Q8NDX1 1056 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 OR6Q1Q8NGQ2 317 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 OR4Q3Q8NH05 313 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 OR1L3Q8NH93 324 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 FANK1Q8TC84 345 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 DOK4Q8TEW6 326 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 PTPMT1Q8WUK0 201 aaPredicted RBP6.89□□□□□ -1.31
CXCR4-202ENST00000409817 RPL3LQ92901 407 aaKnown RBP6.89□□□□□ -1.31
CXCR4-202ENST00000409817 ZNF501Q96CX3 271 aaPredicted RBP6.89□□□□□ -1.31
CXCR4-202ENST00000409817 RNFT2Q96EX2 444 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 SENP5Q96HI0 755 aaPredicted RBP6.89□□□□□ -1.31
CXCR4-202ENST00000409817 CCDC74BQ96LY2 380 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 OPALINQ96PE5 141 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 OR5M11Q96RB7 305 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 SLIRPQ9GZT3 109 aaKnown RBP6.89□□□□□ -1.31
CXCR4-202ENST00000409817 PRMT8Q9NR22 394 aaPredicted RBP6.89□□□□□ -1.31
CXCR4-202ENST00000409817 NDUFB11Q9NX14 153 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 EXOGQ9Y2C4 368 aaKnown RBP6.89□□□□□ -1.31
CXCR4-202ENST00000409817 DTX4Q9Y2E6 619 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 CLCA3PQ9Y6N3 262 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 UNC80Q8N2C7 3258 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 A0A1B0GTQ1 180 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 HRKO00198 91 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 BHLHE40O14503 412 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 PIP5K1CO60331 668 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 ALX3O95076 343 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 CSTAP01040 98 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 CLPSP04118 112 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 IGKV3-11P04433 115 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 CSF2RBP32927 897 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 HOXD12P35452 270 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 CAPZA2P47755 286 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 RFX3P48380 749 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 SLC9A3P48764 834 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 DHPSP49366 369 aaPredicted RBP6.88□□□□□ -1.31
CXCR4-202ENST00000409817 GAS1P54826 345 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 BNC1Q01954 994 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 KCNAB1Q14722 419 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 SHBQ15464 509 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 NR0B2Q15466 257 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 KLHL26Q53HC5 615 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 CLEC12AQ5QGZ9 265 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 C16orf87Q6PH81 154 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 WDR88Q6ZMY6 472 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 RTL4Q6ZR62 310 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 KANSL1Q7Z3B3 1105 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 NUP54Q7Z3B4 507 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 METTL27Q8N6F8 245 aaPredicted RBP6.88□□□□□ -1.31
CXCR4-202ENST00000409817 PLPP5Q8NEB5 264 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 FAM71CQ8NEG0 241 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 C17orf47Q8NEP4 570 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 OR4N2Q8NGD1 307 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 OR4C6Q8NH72 309 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 MCFD2Q8NI22 146 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 FNDC8Q8TC99 324 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 NAT6Q93015 286 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 ZNF775Q96BV0 537 aaPredicted RBP6.88□□□□□ -1.31
CXCR4-202ENST00000409817 LCORQ96JN0 433 aaPredicted RBP6.88□□□□□ -1.31
CXCR4-202ENST00000409817 SAMD8Q96LT4 415 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 COQ7Q99807 217 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 YIPF2Q9BWQ6 316 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 DPH1Q9BZG8 443 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 NXF2Q9GZY0 626 aaKnown RBP6.88□□□□□ -1.31
CXCR4-202ENST00000409817 AKIP1Q9NQ31 210 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 CMC2Q9NRP2 79 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 INPP5EQ9NRR6 644 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 FGF21Q9NSA1 209 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 PILRBQ9UKJ0 227 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 STUB1Q9UNE7 303 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 SIGLEC7Q9Y286 467 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 MAU2Q9Y6X3 613 aa6.88□□□□□ -1.31
CXCR4-202ENST00000409817 CACNA1EQ15878 2313 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms