RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 VEZF1Q14119 521 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 ZNF550Q7Z398 422 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 ADGRG3Q86Y34 549 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 ARMC8Q8IUR7 673 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 OR10Q1Q8NGQ4 319 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 OR10D3Q8NH80 312 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 FIG4Q92562 907 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 TAMM41Q96BW9 452 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 WFDC6Q9BQY6 131 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 PINK1Q9BXM7 581 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 ADAM19Q9H013 955 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 ARMC7Q9H6L4 198 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 COQ10BQ9H8M1 238 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 A1L4Q6 167 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 PRORSD1PA6NEY8 169 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 SERPINB7O75635 380 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 CLDN14O95500 239 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 OPN1SWP03999 348 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 CHRNB4P30926 498 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 APOBEC1P41238 236 aaKnown RBP20.08■□□□□ 0.81
PTCD3-203ENST00000409783 SLC1A3P43003 542 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 SLC7A2P52569 658 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 RPS3AP61247 264 aaKnown RBP20.08■□□□□ 0.81
PTCD3-203ENST00000409783 DUSP7Q16829 419 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 TMEM176BQ3YBM2 270 aaPredicted RBP20.08■□□□□ 0.81
PTCD3-203ENST00000409783 ERICH5Q6P6B1 374 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 PATL1Q86TB9 770 aaKnown RBP20.08■□□□□ 0.81
PTCD3-203ENST00000409783 LIX1LQ8IVB5 337 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 GPR32P1Q8NGA4 272 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 OR2V1Q8NHB1 315 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 LILRB4Q8NHJ6 448 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 ASB5Q8WWX0 329 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 COQ3Q9NZJ6 369 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 ABCD2Q9UBJ2 740 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 TAGLN3Q9UI15 199 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 OSGIN1Q9UJX0 560 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 AP3M1Q9Y2T2 418 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 ZNF175Q9Y473 711 aa20.08■□□□□ 0.81
PTCD3-203ENST00000409783 HSPB2A8KAH6 182 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 TNFSF11O14788 317 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 CXCL13O43927 109 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 RCBTB2O95199 551 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 CD247P20963 164 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 EIF1AXP47813 144 aaKnown RBP20.07■□□□□ 0.8
PTCD3-203ENST00000409783 KCNJ5P48544 419 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 PSME3P61289 254 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 HOXC5Q00444 222 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 KRT72Q14CN4 511 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 HSPB2Q16082 182 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 INTS11Q5TA45 600 aaKnown RBP20.07■□□□□ 0.8
PTCD3-203ENST00000409783 C3orf33Q6P1S2 294 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 SMYD1Q8NB12 490 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 ATP6V1C2Q8NEY4 427 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 BHLHE22Q8NFJ8 381 aaPredicted RBP20.07■□□□□ 0.8
PTCD3-203ENST00000409783 OR2T12Q8NG77 320 aa20.07■□□□□ 0.8
PTCD3-203ENST00000409783 SLC22A20A6NK97 555 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 IL2RAP01589 272 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 UQCRBP14927 111 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 TACR3P29371 465 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 HTR3AP46098 478 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 LIPEQ05469 1076 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 PON3Q15166 354 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 HBMQ6B0K9 141 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 CHMP1BQ7LBR1 199 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 MAMDC2Q7Z304 686 aaPredicted RBP20.06■□□□□ 0.8
PTCD3-203ENST00000409783 MICU2Q8IYU8 434 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 FNDC9Q8TBE3 224 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 OSTF1Q92882 214 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 TM9SF2Q99805 663 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 CHRNA9Q9UGM1 479 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 HECTD1Q9ULT8 2610 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 MPDZO75970 2070 aa20.06■□□□□ 0.8
PTCD3-203ENST00000409783 HCFC1P51610 2035 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 TMED7-TICAM2A0A0A6YYA0 188 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 ELOVL7A1L3X0 281 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 GJE1A6NN92 205 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 TMEM229AB2RXF0 380 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 SYT5O00445 386 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 TPST2O60704 377 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 AQP8O94778 261 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 LGI1O95970 557 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 HTR2AP28223 471 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 GSK3BP49841 420 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 POLR2HP52434 150 aaKnown RBP20.05■□□□□ 0.8
PTCD3-203ENST00000409783 FOXF2Q12947 444 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 WBP2NLQ6ICG8 309 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 BCAS4Q8TDM0 211 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 ZFP3Q96NJ6 502 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 ARHGDIGQ99819 225 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 SRXN1Q9BYN0 137 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 UCK2Q9BZX2 261 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 SERINC1Q9NRX5 453 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 PAQR5Q9NXK6 330 aaPredicted RBP20.05■□□□□ 0.8
PTCD3-203ENST00000409783 TMEM181Q9P2C4 612 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 PLEKHB1Q9UF11 243 aaPredicted RBP20.05■□□□□ 0.8
PTCD3-203ENST00000409783 TMED7Q9Y3B3 224 aa20.05■□□□□ 0.8
PTCD3-203ENST00000409783 KLF2Q9Y5W3 355 aaPredicted RBP20.05■□□□□ 0.8
PTCD3-203ENST00000409783 ASH1LQ9NR48 2969 aaKnown RBP20.05■□□□□ 0.8
PTCD3-203ENST00000409783 A0A1W2PNR3 127 aa20.04■□□□□ 0.8
PTCD3-203ENST00000409783 NDUFAB1O14561 156 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms