RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 AP3M1Q9Y2T2 418 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 ZNF175Q9Y473 711 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 GCM2O75603 506 aaPredicted RBP17.83■□□□□ 0.45
PDLIM2-207ENST00000409417 MFN2O95140 757 aa17.83■□□□□ 0.45
PDLIM2-207ENST00000409417 RCBTB2O95199 551 aa17.83■□□□□ 0.45
PDLIM2-207ENST00000409417 TGM6O95932 706 aa17.83■□□□□ 0.45
PDLIM2-207ENST00000409417 SHC1P29353 583 aa17.83■□□□□ 0.45
PDLIM2-207ENST00000409417 EIF1AXP47813 144 aaKnown RBP17.83■□□□□ 0.45
PDLIM2-207ENST00000409417 SGCBQ16585 318 aa17.83■□□□□ 0.45
PDLIM2-207ENST00000409417 PDSS1Q5T2R2 415 aa17.83■□□□□ 0.45
PDLIM2-207ENST00000409417 INTS11Q5TA45 600 aaKnown RBP17.83■□□□□ 0.45
PDLIM2-207ENST00000409417 C3orf33Q6P1S2 294 aa17.83■□□□□ 0.45
PDLIM2-207ENST00000409417 PLXDC2Q6UX71 529 aa17.83■□□□□ 0.45
PDLIM2-207ENST00000409417 ZNF629Q9UEG4 869 aaPredicted RBP17.83■□□□□ 0.45
PDLIM2-207ENST00000409417 SETXQ7Z333 2677 aaKnown RBP17.83■□□□□ 0.44
PDLIM2-207ENST00000409417 CACNA1CQ13936 2221 aa17.83■□□□□ 0.44
PDLIM2-207ENST00000409417 M0QX08 132 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 TNFSF11O14788 317 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 PRG2P13727 222 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 NUDT2P50583 147 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 DMTNQ08495 405 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 PON3Q15166 354 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 FAM91A1Q658Y4 838 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 HBMQ6B0K9 141 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 C8orf82Q6P1X6 216 aaPredicted RBP17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 ERICH5Q6P6B1 374 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 PATL1Q86TB9 770 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 ATP6V1C2Q8NEY4 427 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 FNDC9Q8TBE3 224 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 SLC25A43Q8WUT9 341 aaPredicted RBP17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 FIG4Q92562 907 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 OSTF1Q92882 214 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 CTPS2Q9NRF8 586 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 CMTM6Q9NX76 183 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 CHRNA9Q9UGM1 479 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 ADGRG4Q8IZF6 3080 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 ARHGAP21Q5T5U3 1957 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 TPST1O60507 370 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 FKBP2P26885 142 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 HTR1EP28566 365 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 POLR2HP52434 150 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 ZNF136P52737 540 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 CARD18P57730 90 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 COPZ1P61923 177 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 VEZF1Q14119 521 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 POMZP3Q6PJE2 187 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 P4HA3Q7Z4N8 544 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 ADGRG3Q86Y34 549 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 LIX1LQ8IVB5 337 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 SLC15A3Q8IY34 581 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 ADAM19Q9H013 955 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 TIGARQ9NQ88 270 aa17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 SPIN1Q9Y657 262 aaPredicted RBP17.82■□□□□ 0.44
PDLIM2-207ENST00000409417 KIAA1549Q9HCM3 1950 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 CENPEQ02224 2701 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 DOCK7Q96N67 2140 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 CCT8L1PA6NM43 557 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 CXCL13O43927 109 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 IL18BPO95998 194 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 FCGR2AP12318 317 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 CTSSP25774 331 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 TACR3P29371 465 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 SLC7A1P30825 629 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 MAP2K6P52564 334 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 SLC25A35Q3KQZ1 300 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 WBP2NLQ6ICG8 309 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 OR2A2Q6IF42 318 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 CCDC80Q76M96 950 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 COMTD1Q86VU5 262 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 CCDC197Q8NCU1 140 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 OR2T12Q8NG77 320 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 INTS12Q96CB8 462 aaKnown RBP17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 KCNJ16Q9NPI9 418 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 OSGIN1Q9UJX0 560 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 SLC13A4Q9UKG4 626 aa17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 MCTS1Q9ULC4 181 aaKnown RBP17.81■□□□□ 0.44
PDLIM2-207ENST00000409417 FAM220BPB1ANY3 271 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 PRSS44E7EML9 344 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 DVL2O14641 736 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 FRS3O43559 492 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 TMIGD3P0DMS9 266 aaPredicted RBP17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 OPRM1P35372 400 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 SLC7A2P52569 658 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 GLIPR1L2Q4G1C9 344 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 SYT14P1Q58G82 188 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 SMYD1Q8NB12 490 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 SFXN3Q9BWM7 321 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 UCK2Q9BZX2 261 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 COQ10BQ9H8M1 238 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 EVA1AQ9H8M9 152 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 RNF122Q9H9V4 155 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 CHST11Q9NPF2 352 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 KLHL28Q9NXS3 571 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 TAGLN3Q9UI15 199 aa17.8■□□□□ 0.44
PDLIM2-207ENST00000409417 INTS1Q8N201 2190 aaKnown RBP17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 TMED7-TICAM2A0A0A6YYA0 188 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 FAM90A27PA6NNH2 459 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 SYT5O00445 386 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 NDUFAB1O14561 156 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 AQP8O94778 261 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms