RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 PRG2P13727 222 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 SHC1P29353 583 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 SFTPDP35247 375 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 TIMP3P35625 211 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 SLC1A3P43003 542 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 HTR3AP46098 478 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 KCNJ5P48544 419 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 GSK3BP49841 420 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 COPZ1P61923 177 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 DUSP7Q16829 419 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 RIPPLY2Q5TAB7 128 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 CHMP1BQ7LBR1 199 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 MRGPRGQ86SM5 289 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 ZNF808Q8N4W9 903 aaPredicted RBP18.26■□□□□ 0.51
PTCD3-202ENST00000409326 MBD3L2Q8NHZ7 208 aaPredicted RBP18.26■□□□□ 0.51
PTCD3-202ENST00000409326 RASSF5Q8WWW0 418 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 NSL1Q96IY1 281 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 CTPS2Q9NRF8 586 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 SERINC1Q9NRX5 453 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 NDE1Q9NXR1 346 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 KLHL28Q9NXS3 571 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 GMPR2Q9P2T1 348 aaKnown RBP18.26■□□□□ 0.51
PTCD3-202ENST00000409326 SLC13A4Q9UKG4 626 aa18.26■□□□□ 0.51
PTCD3-202ENST00000409326 SPTAN1Q13813 2472 aaKnown RBP18.26■□□□□ 0.51
PTCD3-202ENST00000409326 A0A0J9YW62 118 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 OPN1LWP04000 364 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 C8BP07358 591 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 AGAP20933 346 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 CD247P20963 164 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 POLR2HP52434 150 aaKnown RBP18.25■□□□□ 0.51
PTCD3-202ENST00000409326 WBP2NLQ6ICG8 309 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 POMZP3Q6PJE2 187 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 TRPM8Q7Z2W7 1104 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 GPR32P1Q8NGA4 272 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 OR10D3Q8NH80 312 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 OR2V1Q8NHB1 315 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 SLC26A7Q8TE54 656 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 SLC25A43Q8WUT9 341 aaPredicted RBP18.25■□□□□ 0.51
PTCD3-202ENST00000409326 ADAM19Q9H013 955 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 PAQR5Q9NXK6 330 aaPredicted RBP18.25■□□□□ 0.51
PTCD3-202ENST00000409326 COQ3Q9NZJ6 369 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 CHRNA9Q9UGM1 479 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 SPIN1Q9Y657 262 aaPredicted RBP18.25■□□□□ 0.51
PTCD3-202ENST00000409326 ICE1Q9Y2F5 2266 aa18.25■□□□□ 0.51
PTCD3-202ENST00000409326 A0A0G2JNJ9 132 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 TNFSF11O14788 317 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 TOXO94900 526 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 LGI1O95970 557 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 CALB2P22676 271 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 TACR3P29371 465 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 CEACAM8P31997 349 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-202ENST00000409326 EIF1AXP47813 144 aaKnown RBP18.24■□□□□ 0.51
PTCD3-202ENST00000409326 ZNF136P52737 540 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 RGS8P57771 180 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-202ENST00000409326 MXRA7P84157 204 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 SLC25A3Q00325 362 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 TMEM176BQ3YBM2 270 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-202ENST00000409326 PDSS1Q5T2R2 415 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 XKRXQ6PP77 449 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 C16orf89Q6UX73 402 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 ADGRG3Q86Y34 549 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 CADM2Q8N3J6 435 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 C9orf106Q8NAJ2 232 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 ATP6V1C2Q8NEY4 427 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 OR10Q1Q8NGQ4 319 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 WNT2BQ93097 391 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 ZNF845Q96IR2 970 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-202ENST00000409326 ARHGDIGQ99819 225 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 KCTD14Q9BQ13 255 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-202ENST00000409326 ADA2Q9NZK5 511 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 Q9UFV3 132 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 TESQ9UGI8 421 aaKnown RBP18.24■□□□□ 0.51
PTCD3-202ENST00000409326 OSGIN1Q9UJX0 560 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 RNF6Q9Y252 685 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 ZNF175Q9Y473 711 aa18.24■□□□□ 0.51
PTCD3-202ENST00000409326 TMED7-TICAM2A0A0A6YYA0 188 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 IFNA14P01570 189 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 IL2RAP01589 272 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 FKBP2P26885 142 aaKnown RBP18.23■□□□□ 0.51
PTCD3-202ENST00000409326 KDELR2P33947 212 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 HOXC5Q00444 222 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 SGCBQ16585 318 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 NRF1Q16656 503 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 LRRC23Q53EV4 343 aaPredicted RBP18.23■□□□□ 0.51
PTCD3-202ENST00000409326 SYT14P1Q58G82 188 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 HBMQ6B0K9 141 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 PLXDC2Q6UX71 529 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 LSMEM1Q8N8F7 131 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 TNIP2Q8NFZ5 429 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 ASB5Q8WWX0 329 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 SDCCAG3Q96C92 435 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 TM9SF2Q99805 663 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 COQ10BQ9H8M1 238 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 TMED7Q9Y3B3 224 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 USP9YO00507 2555 aaPredicted RBP18.23■□□□□ 0.51
PTCD3-202ENST00000409326 PTPN13Q12923 2485 aa18.23■□□□□ 0.51
PTCD3-202ENST00000409326 SLC22A20A6NK97 555 aa18.22■□□□□ 0.51
PTCD3-202ENST00000409326 HSPB2A8KAH6 182 aa18.22■□□□□ 0.51
PTCD3-202ENST00000409326 CXCL13O43927 109 aa18.22■□□□□ 0.51
PTCD3-202ENST00000409326 TGM6O95932 706 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms