RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 HSD11B1LQ7Z5J1 315 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 IFNEQ86WN2 208 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF679Q8IYX0 411 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 CLDN19Q8N6F1 224 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 ANKFN1Q8N957 763 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 MNS1Q8NEH6 495 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 FLVCR1-AS1Q8TAF5 88 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 FNDC8Q8TC99 324 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 SSC4DQ8WTU2 575 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 FAM151AQ8WW52 585 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 IL1F10Q8WWZ1 152 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 DNAJC19Q96DA6 116 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 C11orf24Q96F05 449 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 C7orf34Q96L11 122 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 CNOT6LQ96LI5 555 aaKnown RBP3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF597Q96LX8 424 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 C9orf85Q96MD7 179 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 CHP1Q99653 195 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 SLC39A3Q9BRY0 314 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 SYT11Q9BT88 431 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 TCHPQ9BT92 498 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 RPP25Q9BUL9 199 aaKnown RBP3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 VPS33BQ9H267 617 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 SCRT2Q9NQ03 307 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 LZTFL1Q9NQ48 299 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 CTSZQ9UBR2 303 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 CHRNA9Q9UGM1 479 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 MLXQ9UH92 298 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 BARX2Q9UMQ3 279 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 V9GYY5 206 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 ABCB11O95342 1321 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 DLEC1Q9Y238 1755 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 TAF1LQ8IZX4 1826 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 IGHV3OR16-12A0A075B7B8 117 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 PES1O00541 588 aaKnown RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 MSH4O15457 936 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 OR1F1O43749 312 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 N4BP1O75113 896 aaKnown RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 TM7SF2O76062 418 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 HCKP08631 526 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 DPEP1P16444 411 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 SDC1P18827 310 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 PAX7P23759 505 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 IGFBP5P24593 272 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 HNRNPH3P31942 346 aaKnown RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 SSR1P43307 286 aaKnown RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 GNPDA1P46926 289 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 CEBPDP49716 269 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 KLK7P49862 253 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 ATP4BP51164 291 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 RPS6P62753 249 aaKnown RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 GANABQ14697 944 aaKnown RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZMYND11Q15326 602 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 PCK2Q16822 640 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 KRTAP24-1Q3LI83 254 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZCWPW2Q504Y3 356 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 LGSNQ5TDP6 509 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 FKBP1CQ5VVH2 108 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 PARGQ86W56 976 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 CCDC65Q8IXS2 484 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 MYOCDQ8IZQ8 938 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 EIF1ADQ8N9N8 165 aaKnown RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 ERMNQ8TAM6 284 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 NANPQ8TBE9 248 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 ACER1Q8TDN7 264 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 EMG1Q92979 244 aaKnown RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 MOCOSQ96EN8 888 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 DNAJA3Q96EY1 480 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 RIT2Q99578 217 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 TSG101Q99816 390 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 LRRC61Q9BV99 259 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 DUSP16Q9BY84 665 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 POLR3FQ9H1D9 316 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 HAUS4Q9H6D7 363 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 NHEJ1Q9H9Q4 299 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 ELOVL3Q9HB03 270 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 ADGRL4Q9HBW9 690 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 APMAPQ9HDC9 416 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 EXOSC3Q9NQT5 275 aaKnown RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNHIT6Q9NWK9 470 aaKnown RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 NTNG1Q9Y2I2 539 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 LTBP1Q14766 1721 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 DDX60LQ5H9U9 1706 aaKnown RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 UBR3Q6ZT12 1888 aa3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 COL2A1P02458 1487 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P18-201ENST00000406327 LRRC37AA6NMS7 1700 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 A0A1B0GTH9 108 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 FAM74A7A6NL05 159 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 CCDC169A6NNP5 214 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 NPIPA7E9PJI5 369 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 UBXN8O00124 270 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 ATP8B1O43520 1251 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 LCMT2O60294 686 aaKnown RBP3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 GNA14O95837 355 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 JCHAINP01591 159 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 HBQ1P09105 142 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 H2BFMP0C1H6 154 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 POLR2MP0CAP2 368 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 NPIPA8P0DM63 369 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 PVRP15151 417 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms