RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ARMC10Q8N2F6 343 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 AMER2Q8N7J2 671 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 CLDN22Q8N7P3 220 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 OR5M3Q8NGP4 307 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 ZNF563Q8TA94 476 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 TEX47Q8TBZ9 253 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 SLC19A3Q9BZV2 496 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 SDHAF3Q9NRP4 125 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 P4HTMQ9NXG6 502 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 CNIH4Q9P003 139 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 MRPS18BQ9Y676 258 aaKnown RBP19.17■□□□□ 0.66
TPM1-208ENST00000404484 ATRXP46100 2492 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 A0A087WUJ7 227 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 KLF4O43474 513 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 SOX14O95416 240 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 IFI30P13284 250 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 P2RX1P51575 399 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 SUMO3P55854 103 aaPredicted RBP19.16■□□□□ 0.66
TPM1-208ENST00000404484 CXCR4P61073 352 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 LSM11P83369 360 aaKnown RBP eCLIP19.16■□□□□ 0.663e-11■■■■□ 21.7
TPM1-208ENST00000404484 CHAF1BQ13112 559 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 CDK5R2Q13319 367 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 MEP1AQ16819 746 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 CTU2Q2VPK5 515 aaKnown RBP19.16■□□□□ 0.66
TPM1-208ENST00000404484 SLX4IPQ5VYV7 408 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 LINC00114Q6XXX2 140 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 TSPAN14Q8NG11 270 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 B4GALNT2Q8NHY0 566 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 OSTF1Q92882 214 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 ZNF566Q969W8 418 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 C3orf49Q96BT1 292 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 SH3YL1Q96HL8 342 aaPredicted RBP19.16■□□□□ 0.66
TPM1-208ENST00000404484 NODALQ96S42 347 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 GPA33Q99795 319 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 ADNPQ9H2P0 1102 aa19.16■□□□□ 0.66
TPM1-208ENST00000404484 NKX2-8O15522 239 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 PIP5K1CO60331 668 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 SERPINA7P05543 415 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 CCDC159P0C7I6 412 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 ELK4P28324 431 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 SLC1A3P43003 542 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 GPR4P46093 362 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 SSR4P51571 173 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 CSNK2BP67870 215 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 RPL13AP3Q6NVV1 102 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 ISLR2Q6UXK2 745 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 Q6ZPB1 254 aaPredicted RBP19.15■□□□□ 0.66
TPM1-208ENST00000404484 TMPRSS11FQ6ZWK6 438 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 RPS19BP1Q86WX3 136 aaKnown RBP19.15■□□□□ 0.66
TPM1-208ENST00000404484 ASB15Q8WXK1 588 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 BPIFA2Q96DR5 249 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 ARSGQ96EG1 525 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 SECISBP2Q96T21 854 aaKnown RBP19.15■□□□□ 0.66
TPM1-208ENST00000404484 TEX12Q9BXU0 123 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 PRRG3Q9BZD7 231 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 TUBA8Q9NY65 449 aaPredicted RBP19.15■□□□□ 0.66
TPM1-208ENST00000404484 KLRF1Q9NZS2 232 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 ICAM5Q9UMF0 924 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 PIEZO2Q9H5I5 2752 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 A0A087WXM4 84 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 TRIM64A6NGJ6 449 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 ELOA3DA6NLF2 546 aaPredicted RBP19.15■□□□□ 0.66
TPM1-208ENST00000404484 NUDT14O95848 222 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 TP53P04637 393 aaPredicted RBP19.15■□□□□ 0.66
TPM1-208ENST00000404484 CELA2AP08217 269 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 SMIM18P0DKX4 95 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 SMSP52788 366 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 TUBA4AP68366 448 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 ZNF791Q3KP31 576 aaPredicted RBP19.15■□□□□ 0.66
TPM1-208ENST00000404484 ELOA3BQ3SY89 546 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 CASP12Q6UXS9 341 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 CCDC71Q8IV32 467 aaPredicted RBP19.15■□□□□ 0.66
TPM1-208ENST00000404484 ENTHD1Q8IYW4 607 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 ELOA3Q8NG57 546 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 TRUB1Q8WWH5 349 aaKnown RBP19.15■□□□□ 0.66
TPM1-208ENST00000404484 RTN4RQ9BZR6 473 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 METTL7AQ9H8H3 244 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 SLC25A19Q9HC21 320 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 RNF6Q9Y252 685 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 PCDHGB6Q9Y5F9 930 aa19.15■□□□□ 0.66
TPM1-208ENST00000404484 HEATR5AQ86XA9 2040 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 UNC119BA6NIH7 251 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 CDC40O60508 579 aaKnown RBP eCLIP19.14■□□□□ 0.65
TPM1-208ENST00000404484 NTN1O95631 604 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 IGF2P01344 180 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 GP1BBP13224 206 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 MSX1P28360 303 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 SOX3P41225 446 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 MLF1P58340 268 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 GABARAPL2P60520 117 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 IL10RAQ13651 578 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 APOFQ13790 326 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 JMJD6Q6NYC1 403 aaPredicted RBP19.14■□□□□ 0.65
TPM1-208ENST00000404484 TMEM81Q6P7N7 255 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 ZNF620Q6ZNG0 422 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 ATG4DQ86TL0 474 aaPredicted RBP19.14■□□□□ 0.65
TPM1-208ENST00000404484 P3H2Q8IVL5 708 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 PFN4Q8NHR9 129 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 DUSP19Q8WTR2 217 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 TMEM43Q9BTV4 400 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms