RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 NXF5Q9H1B4 397 aaKnown RBP16.95■□□□□ 0.3
COL18A1-204ENST00000400337 MED20Q9H944 212 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 PISDQ9UG56 409 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 CER1O95813 267 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 BCL6P41182 706 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 AKR1C2P52895 323 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 PPA1Q15181 289 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 TMEM244Q5VVB8 128 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 DNAJC22Q8N4W6 341 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 CHTF18Q8WVB6 975 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 NUDT22Q9BRQ3 303 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 MCTS1Q9ULC4 181 aaKnown RBP16.95■□□□□ 0.3
COL18A1-204ENST00000400337 ATG4BQ9Y4P1 393 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 V9GY05 133 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 H7C2Y5 167 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 FXYD4P59646 89 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 OR7E24Q6IFN5 339 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 ZNF784Q8NCA9 323 aaPredicted RBP16.95■□□□□ 0.3
COL18A1-204ENST00000400337 MBNL1Q9NR56 388 aaKnown RBP16.95■□□□□ 0.3
COL18A1-204ENST00000400337 DHCR7Q9UBM7 475 aaKnown RBP16.95■□□□□ 0.3
COL18A1-204ENST00000400337 HHLA2Q9UM44 414 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 ANKRD36CQ5JPF3 1778 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 SMCO3A2RU48 225 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 IRF2P14316 349 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 KIAA1211LQ6NV74 962 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 B3GLCTQ6Y288 498 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 RCBTB1Q8NDN9 531 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 OR14A16Q8NHC5 309 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 FAM174AQ8TBP5 190 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 NEURL3Q96EH8 262 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 CCDC86Q9H6F5 360 aaKnown RBP16.95■□□□□ 0.3
COL18A1-204ENST00000400337 GALR3O60755 368 aaPredicted RBP16.95■□□□□ 0.3
COL18A1-204ENST00000400337 B3GALT4O96024 378 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 ARL14Q8N4G2 192 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 OR13H1Q8NG92 308 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 ASB16Q96NS5 453 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 SYT3Q9BQG1 590 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 ST6GALNAC5Q9BVH7 336 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 FAM86C1Q9NVL1 165 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 EFCAB7A8K855 629 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 ABHD17CQ6PCB6 329 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 RNF113BQ8IZP6 322 aaKnown RBP16.94■□□□□ 0.3
COL18A1-204ENST00000400337 RPL3LQ92901 407 aaKnown RBP16.94■□□□□ 0.3
COL18A1-204ENST00000400337 MRPL38Q96DV4 380 aaKnown RBP16.94■□□□□ 0.3
COL18A1-204ENST00000400337 MRI1Q9BV20 369 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 RHBDD3Q9Y3P4 386 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 NRAPQ86VF7 1730 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 TMEM269A0A1B0GVZ9 245 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 TRIM64CA6NLI5 447 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 HOXC11O43248 304 aaPredicted RBP16.94■□□□□ 0.3
COL18A1-204ENST00000400337 IGLV3-25P01717 112 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 NPR2P20594 1047 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 CTHP32929 405 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 NKAIN2Q5VXU1 208 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 BORAQ6PGQ7 559 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 OPN5Q6U736 354 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 DNAAF1Q8NEP3 725 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 CNOT9Q92600 299 aaKnown RBP16.94■□□□□ 0.3
COL18A1-204ENST00000400337 PDXPQ96GD0 296 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 OR10A5Q9H207 317 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 PLEKHJ1Q9NW61 149 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 B3GALT1Q9Y5Z6 326 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 LAMA4Q16363 1823 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 H3BUI4 141 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 NUDT21O43809 227 aaKnown RBP16.94■□□□□ 0.3
COL18A1-204ENST00000400337 APLNRP35414 380 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 MRPL58Q14197 206 aaKnown RBP16.94■□□□□ 0.3
COL18A1-204ENST00000400337 OR5D14Q8NGL3 314 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 NUDT8Q8WV74 236 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 KATNB1Q9BVA0 655 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 MCOLN1Q9GZU1 580 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 ELOVL3Q9HB03 270 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 OBP2AQ9NY56 170 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 FAM230AA0A1W2PPH8 454 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 HTR2AP28223 471 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 FGL2Q14314 439 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 MBTPS1Q14703 1052 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 RLIMQ9NVW2 624 aa16.94■□□□□ 0.3
COL18A1-204ENST00000400337 A0A0G2JMP0 313 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 SLC22A5O76082 557 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 TFAP2AP05549 437 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 HTR2BP41595 481 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 SF3A2Q15428 464 aaKnown RBP16.93■□□□□ 0.3
COL18A1-204ENST00000400337 PTRH1Q86Y79 214 aaKnown RBP16.93■□□□□ 0.3
COL18A1-204ENST00000400337 OR4M2Q8NGB6 313 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 DUSP19Q8WTR2 217 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 RRNAD1Q96FB5 475 aaKnown RBP16.93■□□□□ 0.3
COL18A1-204ENST00000400337 TNFRSF13CQ96RJ3 184 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 TSNAXQ99598 290 aaKnown RBP16.93■□□□□ 0.3
COL18A1-204ENST00000400337 ULBP3Q9BZM4 244 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 PHIPQ8WWQ0 1821 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 ZNF736B4DX44 427 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-204ENST00000400337 H3BNC9 293 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 CDK4P11802 303 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 ADH6P28332 368 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 TACR3P29371 465 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 OPRD1P41143 372 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 GPR19Q15760 415 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 TMEM201Q5SNT2 666 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 SLC48A1Q6P1K1 146 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms