RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 OR5M10Q6IEU7 315 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 RNF113BQ8IZP6 322 aaKnown RBP9.34□□□□□ -0.91
PTPRM-203ENST00000400060 HMGCLL1Q8TB92 370 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 SLAMF9Q96A28 289 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 TMEM19Q96HH6 336 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 PRAP1Q96NZ9 151 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 NIPSNAP3BQ9BS92 247 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 ACPTQ9BZG2 426 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 FN3KRPQ9HA64 309 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 EXO1Q9UQ84 846 aaKnown RBP9.34□□□□□ -0.91
PTPRM-203ENST00000400060 LOC390937A0A1W2PQ73 354 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 SYT7O43581 403 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 IFNA5P01569 189 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 HNF1AP20823 631 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 EDNRBP24530 442 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 LSSP48449 732 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 PXNP49023 591 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-203ENST00000400060 NCBP2P52298 156 aaKnown RBP eCLIP9.34□□□□□ -0.91
PTPRM-203ENST00000400060 DVL1P1P54792 670 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-203ENST00000400060 NHLH2Q02577 135 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 ZNF789Q5FWF6 425 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 OR52W1Q6IF63 320 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 RNF44Q7L0R7 432 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 ADPRHL1Q8NDY3 354 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 OR2AP1Q8NGE2 309 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 UBE2FQ969M7 185 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 RAB24Q969Q5 203 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 TEX37Q96LM6 180 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 VPS25Q9BRG1 176 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 RHOFQ9HBH0 211 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 LRFN1Q9P244 771 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 SCGB1D2O95969 90 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 PRDX3P30048 256 aaKnown RBP9.34□□□□□ -0.91
PTPRM-203ENST00000400060 MPIP34949 423 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 GDF5P43026 501 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 PTGFRP43088 359 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 FKBP1BP68106 108 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 JAG1P78504 1218 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 SLBPQ14493 270 aaKnown RBP eCLIP9.34□□□□□ -0.91
PTPRM-203ENST00000400060 P2RY14Q15391 338 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 SYT14P1Q58G82 188 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 IL20RBQ6UXL0 311 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 TMPRSS9Q7Z410 1059 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 NPWQ8N729 165 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 SMPDL3BQ92485 455 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 LYRM2Q9NU23 88 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-203ENST00000400060 PCDHB10Q9UN67 800 aa9.34□□□□□ -0.91
PTPRM-203ENST00000400060 AK6Q9Y3D8 172 aaKnown RBP9.34□□□□□ -0.91
PTPRM-203ENST00000400060 ANKRD66B4E2M5 251 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 CSNK2A2P19784 350 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-203ENST00000400060 ARSDP51689 593 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 PGGT1BP53609 377 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 FABP5Q01469 135 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 C21orf62-AS1Q17RA5 79 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.33□□□□□ -0.926e-6■■■■□ 22.6
PTPRM-203ENST00000400060 C12orf73Q69YU5 71 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 CXCL17Q6UXB2 119 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 USP53Q70EK8 1073 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 ZNF383Q8NA42 475 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 OR6K6Q8NGW6 343 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 RXFP4Q8TDU9 374 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 PCED1BQ96HM7 432 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 MTIF3Q9H2K0 278 aaKnown RBP9.33□□□□□ -0.92
PTPRM-203ENST00000400060 HS3ST4Q9Y661 456 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 TEX13DA0A0J9YY54 714 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-203ENST00000400060 FAM72CH0Y354 149 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 PPM1DO15297 605 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 EIF1BO60739 113 aaKnown RBP9.33□□□□□ -0.92
PTPRM-203ENST00000400060 NDUFB6O95139 128 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 RPLP1P05386 114 aaKnown RBP9.33□□□□□ -0.92
PTPRM-203ENST00000400060 HOXB3P14651 431 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-203ENST00000400060 ELAVL4P26378 380 aaKnown RBP9.33□□□□□ -0.92
PTPRM-203ENST00000400060 G0S2P27469 103 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 EIF1P41567 113 aaKnown RBP9.33□□□□□ -0.92
PTPRM-203ENST00000400060 DGCR2P98153 550 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 LTBQ06643 244 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 SLC5A12Q1EHB4 618 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 MPPE1Q53F39 396 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 C9orf152Q5JTZ5 239 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 FAM72AQ5TYM5 149 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 FAM72DQ6L9T8 149 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 TMEM71Q6P5X7 295 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 ANKRD16Q6P6B7 361 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 FAM72BQ86X60 149 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 ARHGAP12Q8IWW6 846 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 SLC35F2Q8IXU6 374 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 RELL2Q8NC24 303 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-203ENST00000400060 ECHDC3Q96DC8 303 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 ZNF426Q9BUY5 554 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 GPATCH2Q9NW75 528 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 ADAMTSL3P82987 1691 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 COL2A1P02458 1487 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-203ENST00000400060 A0A0B4J2A0 478 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 MTMR11A4FU01 709 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 JTBO76095 146 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 NFATC1O95644 943 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 F2P00734 622 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 TGFB1P01137 390 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 SFTPBP07988 381 aa9.33□□□□□ -0.92
PTPRM-203ENST00000400060 SNRPBP14678 240 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms