RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PCNPQ8WW12 178 aaKnown RBP12.87□□□□□ -0.35
VAPA-202ENST00000400000 PSMF1Q92530 271 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 TRIB3Q96RU7 358 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 PLCXD1Q9NUJ7 323 aa12.87□□□□□ -0.35
VAPA-202ENST00000400000 PRKNO60260 465 aaPredicted RBP12.86□□□□□ -0.35
VAPA-202ENST00000400000 GLSO94925 669 aaPredicted RBP12.86□□□□□ -0.35
VAPA-202ENST00000400000 TPOP07202 933 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 KIAA0907Q7Z7F0 614 aaPredicted RBP12.86□□□□□ -0.35
VAPA-202ENST00000400000 CLSTN3Q9BQT9 956 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 F5H5P2 479 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 UGDHO60701 494 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 AK1P00568 194 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 IFNA10P01566 189 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 UGT2B7P16662 529 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 HLA-FP30511 346 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 SELENOWP63302 87 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 ACSM3Q53FZ2 586 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 ZNF468Q5VIY5 522 aaPredicted RBP12.86□□□□□ -0.35
VAPA-202ENST00000400000 SHEQ5VZ18 495 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 SIRT6Q8N6T7 355 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 APMAPQ9HDC9 416 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 MEPEQ9NQ76 525 aaPredicted RBP12.86□□□□□ -0.35
VAPA-202ENST00000400000 ZNF736B4DX44 427 aaPredicted RBP12.86□□□□□ -0.35
VAPA-202ENST00000400000 H0YGG7 62 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 JRKO75564 520 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 EDN1P05305 212 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 FGFBP1Q14512 234 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 ZNF181Q2M3W8 571 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 CTSL3PQ5NE16 218 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 DTWD1Q8N5C7 304 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 BORCS6Q96GS4 357 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 LOXHD1Q8IVV2 1947 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 LOC105369274A0A096LPK9 316 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 TMEM269A0A1B0GVZ9 245 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 H0YAE9 185 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 H3BMQ9 156 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 H7C1Q1 480 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 GM2AP17900 193 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 ALDH3B2P48448 385 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 PODNL1Q6PEZ8 512 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 OR4N4Q8N0Y3 316 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 CDRT4Q8N9R6 151 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 OR5D14Q8NGL3 314 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 NRSN2Q9GZP1 204 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 DEFB127Q9H1M4 99 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 HRH4Q9H3N8 390 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 B4DXG7 233 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 GMDSO60547 372 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 FBXO24O75426 580 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 SDC1P18827 310 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 EFNA3P52797 238 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 SBSNQ6UWP8 590 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 MMP21Q8N119 569 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 TUBA1CQ9BQE3 449 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 PCDHGA7Q9Y5G6 932 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 ENPP4Q9Y6X5 453 aa12.86□□□□□ -0.35
VAPA-202ENST00000400000 ARID1BQ8NFD5 2236 aaPredicted RBP12.86□□□□□ -0.35
VAPA-202ENST00000400000 SEC14L2O76054 403 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 RAB31Q13636 194 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 FAM111BQ6SJ93 734 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 TMEM135Q86UB9 458 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 GMLQ99445 158 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 PBDC1Q9BVG4 233 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 LUZP4Q9P127 313 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 PUS1Q9Y606 427 aaKnown RBP eCLIP12.85□□□□□ -0.35
VAPA-202ENST00000400000 G3V2L1 256 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 OR7C1O76099 320 aaPredicted RBP12.85□□□□□ -0.35
VAPA-202ENST00000400000 ITGB2P05107 769 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 MS4A2Q01362 244 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 SLC10A1Q14973 349 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 MPP7Q5T2T1 576 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 AADACL3Q5VUY0 350 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 C18orf63Q68DL7 685 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 TRILQ7L0X0 811 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 OVCH1Q7RTY7 1134 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 KDM8Q8N371 416 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 ADAMTS16Q8TE57 1224 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 FAM210AQ96ND0 272 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 UTP23Q9BRU9 249 aaKnown RBP12.85□□□□□ -0.35
VAPA-202ENST00000400000 CDCP1Q9H5V8 836 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 TMEM45AQ9NWC5 275 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 A0A1W2PQ09 198 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 SOBPA7XYQ1 873 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 ZNF705GA8MUZ8 300 aaPredicted RBP12.85□□□□□ -0.35
VAPA-202ENST00000400000 ZFAND5O76080 213 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 HLCSP50747 726 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 HNRNPA1L2Q32P51 320 aaKnown RBP12.85□□□□□ -0.35
VAPA-202ENST00000400000 ELMOD3Q96FG2 381 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 ATPIF1Q9UII2 106 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 NID2Q14112 1375 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 NPBWR1P48145 328 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 FOXC1Q12948 553 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 HABP2Q14520 560 aaPredicted RBP12.85□□□□□ -0.35
VAPA-202ENST00000400000 SHHQ15465 462 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 AARDQ4LEZ3 155 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 TBPL2Q6SJ96 375 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 CLEC14AQ86T13 490 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 ZNF687Q8N1G0 1237 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 DEDD2Q8WXF8 326 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 SIDT1Q9NXL6 827 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms