RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ING1Q9UK53 422 aaPredicted RBP15.84■□□□□ 0.13
PTPRA-205ENST00000399903 PLXND1Q9Y4D7 1925 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 UBE2QL1A1L167 161 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 OR2W5A6NFC9 320 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 PSMD9O00233 223 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 MT-ND5P03915 603 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 GABRA1P14867 456 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 PPP3CBP16298 524 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 UGT2B7P16662 529 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 CAPZA2P47755 286 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 MMP15P51511 669 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 CLDN2P57739 230 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 RGS8P57771 180 aaPredicted RBP15.84■□□□□ 0.13
PTPRA-205ENST00000399903 TSPAN31Q12999 210 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 PDE7AQ13946 482 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 RPE65Q16518 533 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 OR5P2Q8WZ92 322 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 BBS4Q96RK4 519 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 MNTQ99583 582 aa15.84■□□□□ 0.13
PTPRA-205ENST00000399903 GPN1Q9HCN4 374 aaPredicted RBP15.84■□□□□ 0.13
PTPRA-205ENST00000399903 ALPK2Q86TB3 2170 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 SERTM1A2A2V5 107 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 PPM1DO15297 605 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 HTR1FP30939 366 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 RAP2BP61225 183 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 DHCR24Q15392 516 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 TCEA2Q15560 299 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 C2orf68Q2NKX9 166 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 OR2T33Q8NG76 320 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 OSTF1Q92882 214 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 KCTD12Q96CX2 325 aaKnown RBP15.83■□□□□ 0.13
PTPRA-205ENST00000399903 MACROD1Q9BQ69 325 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 CMSS1Q9BQ75 279 aaKnown RBP15.83■□□□□ 0.13
PTPRA-205ENST00000399903 DPH1Q9BZG8 443 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 KCNE3Q9Y6H6 103 aa15.83■□□□□ 0.13
PTPRA-205ENST00000399903 ANKRD61A6NGH8 418 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 PRRT4C9JH25 899 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 KLHL18O94889 574 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 CHRM4P08173 479 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 EN2P19622 333 aaPredicted RBP15.83■□□□□ 0.12
PTPRA-205ENST00000399903 SERTAD2Q14140 314 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 CBARPQ8N350 705 aaPredicted RBP15.83■□□□□ 0.12
PTPRA-205ENST00000399903 PXT1Q8NFP0 134 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 OR5J2Q8NH18 312 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 ZCCHC2Q9C0B9 1178 aaKnown RBP15.83■□□□□ 0.12
PTPRA-205ENST00000399903 ESRP2Q9H6T0 727 aaKnown RBP15.83■□□□□ 0.12
PTPRA-205ENST00000399903 SLC22A11Q9NSA0 550 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 MRPS18AQ9NVS2 196 aaKnown RBP15.83■□□□□ 0.12
PTPRA-205ENST00000399903 LINC00587B1AMM8 73 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 ELFN1P0C7U0 828 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 NCBP2P52298 156 aaKnown RBP eCLIP15.83■□□□□ 0.12
PTPRA-205ENST00000399903 EFNB1P98172 346 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 STX4Q12846 297 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 SLC25A30Q5SVS4 291 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 FCRLAQ7L513 359 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 DOK4Q8TEW6 326 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 MRGPRX3Q96LB0 322 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 OR14A2Q96R54 314 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 TMEM185BQ9H7F4 350 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 FBXL4Q9UKA2 621 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 CA5BQ9Y2D0 317 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 PCDHGA5Q9Y5G8 931 aa15.83■□□□□ 0.12
PTPRA-205ENST00000399903 KIAA0355O15063 1070 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 SCAMP1O15126 338 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 SGCEO43556 437 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 SIGLEC6O43699 453 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 F12P00748 615 aaPredicted RBP15.82■□□□□ 0.12
PTPRA-205ENST00000399903 KCNJ3P48549 501 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 TRAM2Q15035 370 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 ZNF77Q15935 545 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 SLC16A13Q7RTY0 426 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 RASGEF1AQ8N9B8 481 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 GAL3ST1Q99999 423 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 EFCAB11Q9BUY7 163 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 LHX6Q9UPM6 363 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 CDHR4A6H8M9 788 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 TUBAL3A6NHL2 446 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 OR5K4A6NMS3 321 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 PLPP1O14494 284 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 TO15178 435 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 EPPINO95925 133 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 ACADLP28330 430 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 NOS3P29474 1203 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 TRHRP34981 398 aaPredicted RBP15.82■□□□□ 0.12
PTPRA-205ENST00000399903 IKZF1Q13422 519 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 TMEM240Q5SV17 173 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 PRPF38BQ5VTL8 546 aaKnown RBP15.82■□□□□ 0.12
PTPRA-205ENST00000399903 C1orf53Q5VUE5 145 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 PRAMEF13Q5VWM6 474 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 ZCCHC12Q6PEW1 402 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 PARS2Q7L3T8 475 aaKnown RBP15.82■□□□□ 0.12
PTPRA-205ENST00000399903 ELP4Q96EB1 424 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 LYSMD1Q96S90 227 aa15.82■□□□□ 0.12
PTPRA-205ENST00000399903 A0A0G2JK05 382 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 KIAA1211LQ6NV74 962 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 C7orf61Q8IZ16 206 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 ARL14Q8N4G2 192 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 OR56A3Q8NH54 315 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 FGF11Q92914 225 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 RAD51AP1Q96B01 352 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms