RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 P2RX2Q9UBL9 471 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 PRDM4Q9UKN5 801 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 PLEKHA6Q9Y2H5 1048 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 DSPPQ9NZW4 1301 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 FLNAP21333 2647 aaKnown RBP13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 A0A1W2PNR3 127 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 A0A1W2PPR1 153 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 CLDN24A6NM45 220 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 DEFB108AA8MXU0 73 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 FAAHO00519 579 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 ANP32DO95626 131 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 DBIP07108 87 aaKnown RBP13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 YES1P07947 543 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 NR2F1P10589 423 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 H2AFXP16104 143 aaPredicted RBP13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 PSMB1P20618 241 aaKnown RBP13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 STX1BP61266 288 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 CSNK2A1P68400 391 aaPredicted RBP13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 IRX1P78414 480 aaPredicted RBP13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 POU4F3Q15319 338 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 EXOC3L2Q2M3D2 409 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 STAC2Q6ZMT1 411 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 GOLGA6L1Q8N7Z2 621 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 ZNF563Q8TA94 476 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 CNOT9Q92600 299 aaKnown RBP13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 GTF2H4Q92759 462 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 VPS33AQ96AX1 596 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 OR5B2Q96R09 309 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 KLHL4Q9C0H6 718 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 CHRNA9Q9UGM1 479 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 FREM1Q5H8C1 2179 aa13.25□□□□□ -0.29
SMIM11A-203ENST00000399299 SMAD9O15198 467 aaKnown RBP13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 SIAH2O43255 324 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 CYTIPO60759 359 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 ATE1O95260 518 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 ETFAP13804 333 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 IL7RP16871 459 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 ENPP1P22413 925 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 RYKP34925 604 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 HTR3AP46098 478 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 CLK1P49759 484 aaKnown RBP13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 DIO1P49895 249 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 IDH3AP50213 366 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 CRISP3P54108 245 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 DSTNP60981 165 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 PPP2R2AP63151 447 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 MAPK11Q15759 364 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 C6orf10Q5SRN2 563 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 TFAP2EQ6VUC0 442 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 TMPPEQ6ZT21 453 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 ZNF550Q7Z398 422 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 HMGN2P46Q86SG4 172 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 TUSC5Q8IXB3 177 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 PEX5LQ8IYB4 626 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 ZNF440Q8IYI8 595 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 DYDC1Q8WWB3 177 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 STON2Q8WXE9 905 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 PSD2Q9BQI7 771 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 PAIP1Q9H074 479 aaKnown RBP13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 C12orf49Q9H741 205 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 CTPS2Q9NRF8 586 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 INTS9Q9NV88 658 aaKnown RBP13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 TMEM45AQ9NWC5 275 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 GPR52Q9Y2T5 361 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 HDGFL3Q9Y3E1 203 aa13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 SETD2Q9BYW2 2564 aaPredicted RBP13.24□□□□□ -0.29
SMIM11A-203ENST00000399299 SULT2B1O00204 365 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 DNPH1O43598 174 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 ADAM11O75078 769 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 TFPTP0C1Z6 253 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 UQCRBP14927 111 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 HOXB9P17482 250 aaPredicted RBP13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 CRATP43155 626 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 IDH2P48735 452 aaKnown RBP13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 MAP2K6P52564 334 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 FADDQ13158 208 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 KEAP1Q14145 624 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 ZSWIM7Q19AV6 140 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 GTDC1Q4AE62 458 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 MRPL2Q5T653 305 aaKnown RBP13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 NUFIP2Q7Z417 695 aaKnown RBP13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 GABRG1Q8N1C3 465 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 AURKBQ96GD4 344 aaPredicted RBP13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 EBF4Q9BQW3 602 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 RAD21L1Q9H4I0 556 aa13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 C6orf203Q9P0P8 240 aaPredicted RBP13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 ING1Q9UK53 422 aaPredicted RBP13.23□□□□□ -0.29
SMIM11A-203ENST00000399299 RAI1Q7Z5J4 1906 aaPredicted RBP13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 A0A096LPI6 279 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 IGHV3-15A0A0B4J1V0 119 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 TMEM247A6NEH6 219 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 CFAP73A6NFT4 308 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 ZNF724A8MTY0 619 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 AP3D1O14617 1153 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 GCM2O75603 506 aaPredicted RBP13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 PMS2P2O95744 297 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 BCHEP06276 602 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 THBDP07204 575 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 FESP07332 822 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 THBS1P07996 1170 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms