RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SLC7A1P30825 629 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SEC24CP53992 1094 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 GYS2P54840 703 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CDK6Q00534 326 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 EPS8Q12929 822 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 GUSBP1Q15486 140 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ZNF239Q16600 458 aaKnown RBP12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 LIN52Q52LA3 116 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ZNF311Q5JNZ3 666 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 GDF7Q7Z4P5 450 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ADGRG3Q86Y34 549 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 OR5B2Q96R09 309 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SLC39A3Q9BRY0 314 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 RBM24Q9BX46 236 aaKnown RBP12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 BCL2L10Q9HD36 194 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ARMCX1Q9P291 453 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 IGHV3-15A0A0B4J1V0 119 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 LOC100653049A0A140TA62 436 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 A8MXE2 369 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 FRS3O43559 492 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 KRT34O76011 436 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PLGP00747 810 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 THBS1P07996 1170 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PABPC4LP0CB38 370 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 KLK2P20151 261 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CCNA2P20248 432 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ENPP1P22413 925 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 AQP1P29972 269 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 APOBEC1P41238 236 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ACAA2P42765 397 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CPA2P48052 419 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 LARS2Q15031 903 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SYT14P1Q58G82 188 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 RNF220Q5VTB9 566 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PRAMEF8Q5VWM4 474 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PRAMEF7Q5VXH5 474 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 REEP3Q6NUK4 255 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 FAM214BQ7L5A3 538 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 GRINAQ7Z429 371 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 BBS10Q8TAM1 723 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ABHD3Q8WU67 409 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CPNE4Q96A23 557 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ARL5BQ96KC2 179 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 OR11A1Q9GZK7 315 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 OPN3Q9H1Y3 402 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PIGMQ9H3S5 423 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 TMEM38AQ9H6F2 299 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SERINC1Q9NRX5 453 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 GALNT8Q9NY28 637 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CHRNA9Q9UGM1 479 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ZNF232Q9UNY5 417 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CORO2BQ9UQ03 480 aa12.6□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CGAP01215 116 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ETS2P15036 469 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 TACR3P29371 465 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CPOXP36551 454 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 KRTAP10-9P60411 292 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 HOXC5Q00444 222 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 TLE4Q04727 773 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 MYBPHQ13203 477 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SCARB2Q14108 478 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ZNF474Q6S9Z5 364 aaPredicted RBP12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SERPINA11Q86U17 422 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 COMTD1Q86VU5 262 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SNX32Q86XE0 403 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PTOV1Q86YD1 416 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 RNF128Q8TEB7 428 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 LRRC46Q96FV0 321 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 REXO5Q96IC2 774 aaKnown RBP12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 GMPPAQ96IJ6 420 aaPredicted RBP12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SPATA9Q9BWV2 254 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 TIGARQ9NQ88 270 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CRIM1Q9NZV1 1036 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 FOXD3Q9UJU5 478 aaPredicted RBP12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 OSGIN1Q9UJX0 560 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 IFT52Q9Y366 437 aa12.59□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ANKHD1Q8IWZ3 2542 aaKnown RBP12.58□□□□□ -0.39
HLA-DQB1-202ENST00000399079 TMED7-TICAM2A0A0A6YYA0 188 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 MSTNO14793 375 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TFPIP10646 304 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SLC6A2P23975 617 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SLC1A3P43003 542 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 KIR2DL3P43628 341 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 DIO1P49895 249 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 RAC3P60763 192 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CYP51A1Q16850 503 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 MMEL1Q495T6 779 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 GLIPR1L2Q4G1C9 344 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 REP15Q6BDI9 236 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 NANOGP8Q6NSW7 305 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 FCRLAQ7L513 359 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZZZ3Q8IYH5 903 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CADM2Q8N3J6 435 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZNF610Q8N9Z0 462 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 LINC01560Q8TB33 94 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 C14orf79Q96F83 325 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ELAC2Q9BQ52 826 aaKnown RBP12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 FAM107BQ9H098 131 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PIF1Q9H611 641 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 KAT8Q9H7Z6 458 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms