RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 GALNT16Q8N428 558 aa17.72■□□□□ 0.43
PDLIM2-205ENST00000397761 FADS6Q8N9I5 356 aa17.72■□□□□ 0.43
PDLIM2-205ENST00000397761 WDSUB1Q8N9V3 476 aa17.72■□□□□ 0.43
PDLIM2-205ENST00000397761 ZNF563Q8TA94 476 aa17.72■□□□□ 0.43
PDLIM2-205ENST00000397761 ST8SIA1Q92185 356 aa17.72■□□□□ 0.43
PDLIM2-205ENST00000397761 FAM46AQ96IP4 442 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-205ENST00000397761 MUS81Q96NY9 551 aa17.72■□□□□ 0.43
PDLIM2-205ENST00000397761 C20orf141Q9NUB4 165 aa17.72■□□□□ 0.43
PDLIM2-205ENST00000397761 STMN3Q9NZ72 180 aa17.72■□□□□ 0.43
PDLIM2-205ENST00000397761 MSRB2Q9Y3D2 182 aa17.72■□□□□ 0.43
PDLIM2-205ENST00000397761 PCDHGB5Q9Y5G0 923 aa17.72■□□□□ 0.43
PDLIM2-205ENST00000397761 APC2O95996 2303 aa17.72■□□□□ 0.43
PDLIM2-205ENST00000397761 IGKV1D-42A0A075B6H8 117 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 C2orf72A6NCS6 295 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 BCKDKO14874 412 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 GP1BBP13224 206 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 CHMP24386 653 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 TACR3P29371 465 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 ST13P50502 369 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 CRISP1P54107 249 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 ABHD17BQ5VST6 288 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 ZNF691Q5VV52 312 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 TTC33Q6PID6 262 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 RASSF6Q6ZTQ3 369 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 OR2M3Q8NG83 312 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 PFN4Q8NHR9 129 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 TMEM234Q8WY98 164 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 TAS2R10Q9NYW0 307 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 SSUH2Q9Y2M2 353 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 HSPE1-MOB4S4R3N1 261 aa17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 MAP1BP46821 2468 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-205ENST00000397761 ACACAQ13085 2346 aa17.71■□□□□ 0.42
PDLIM2-205ENST00000397761 ELOA3DA6NLF2 546 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 ZAR1LA6NP61 321 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 NUDT14O95848 222 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 HTR3AP46098 478 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 CYB561P49447 251 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 CDC20Q12834 499 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 ELOA3BQ3SY89 546 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 SLC25A53Q5H9E4 307 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 OR5M10Q6IEU7 315 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 GRINAQ7Z429 371 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 MDGA2Q7Z553 956 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 CLDN22Q8N7P3 220 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 ELOA3Q8NG57 546 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 SNIP1Q8TAD8 396 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 RNF217Q8TC41 542 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 FBLIM1Q8WUP2 373 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 GATA6Q92908 595 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 BPIFA2Q96DR5 249 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 MED11Q9P086 117 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 OSGIN1Q9UJX0 560 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 POLHQ9Y253 713 aa17.7■□□□□ 0.42
PDLIM2-205ENST00000397761 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 ARGFXA6NJG6 315 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 CDC42EP2O14613 210 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 SNPHO15079 494 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 SNX4O95219 450 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 IFI30P13284 250 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 PRKCAP17252 672 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 SPINK2P20155 84 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 MAKP20794 623 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 GGT2P36268 569 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 GPR4P46093 362 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 ISL1P61371 349 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 PTGES3Q15185 160 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 PRAMEF20Q5VT98 475 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 KIF18BQ86Y91 864 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 CCDC71Q8IV32 467 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 C8orf59Q8N0T1 100 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 KCNE4Q8WWG9 221 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 TMEM41AQ96HV5 264 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 DSN1Q9H410 356 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 IL20Q9NYY1 176 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 ABI3Q9P2A4 366 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 GMPPBQ9Y5P6 360 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 TLX3O43711 291 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 TRIM3O75382 744 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 CD96P40200 585 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 POLR2HP52434 150 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 EGR4Q05215 589 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 RAPSNQ13702 412 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 TUBA3CQ13748 450 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 TUBA3EQ6PEY2 450 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 Q6ZPB1 254 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 THAP5Q7Z6K1 395 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 MEX3DQ86XN8 651 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 PLCZ1Q86YW0 608 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 ZNF248Q8NDW4 579 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 PSD4Q8NDX1 1056 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 SETD9Q8NE22 299 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 DPH1Q9BZG8 443 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 ING2Q9H160 280 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 PNPLA3Q9NST1 481 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 SACM1LQ9NTJ5 587 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 MED17Q9NVC6 651 aa17.69■□□□□ 0.42
PDLIM2-205ENST00000397761 KPNA4O00629 521 aaPredicted RBP17.68■□□□□ 0.42
PDLIM2-205ENST00000397761 EFSO43281 561 aa17.68■□□□□ 0.42
PDLIM2-205ENST00000397761 GMFGO60234 142 aa17.68■□□□□ 0.42
PDLIM2-205ENST00000397761 NEURL1O76050 574 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms