RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SLC13A4Q9UKG4 626 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 CNOT11Q9UKZ1 510 aaKnown RBP12.35□□□□□ -0.43
SEC13-205ENST00000397101 ZNF232Q9UNY5 417 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 STAB1Q9NY15 2570 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 NPIPA5A0A0B4J1W7 369 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 SH3D21A4FU49 640 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 EEF1E1-BLOC1S5C9J1V9 151 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 INAFM1C9JVW0 142 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 NPIPA7E9PJI5 369 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 EEF1E1O43324 174 aaKnown RBP12.34□□□□□ -0.43
SEC13-205ENST00000397101 FCMRO60667 390 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 SERPINA1P01009 418 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 OPN1SWP03999 348 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 NPIPA8P0DM63 369 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 BMP7P18075 431 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 ABCD3P28288 659 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 CLK3P49761 638 aaKnown RBP12.34□□□□□ -0.43
SEC13-205ENST00000397101 ERFP50548 548 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 FUT5Q11128 374 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 EFR3AQ14156 821 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 NTRK2Q16620 822 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 PRAMEF20Q5VT98 475 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 PRAMEF8Q5VWM4 474 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 PRAMEF7Q5VXH5 474 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 TYW3Q6IPR3 259 aaKnown RBP12.34□□□□□ -0.43
SEC13-205ENST00000397101 ARMC8Q8IUR7 673 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 FAM13CQ8NE31 585 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 ZPLD1Q8TCW7 415 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 LZICQ8WZA0 190 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 DIO2Q92813 273 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 TMCO6Q96DC7 493 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 RSRC1Q96IZ7 334 aaKnown RBP12.34□□□□□ -0.43
SEC13-205ENST00000397101 TPD52L3Q96J77 140 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 ZNF597Q96LX8 424 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 DOHHQ9BU89 302 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 SFXN3Q9BWM7 321 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 HOXD1Q9GZZ0 328 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 RPS6KA6Q9UK32 745 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 V9GYQ6 96 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 TLN2Q9Y4G6 2542 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 ARID1AO14497 2285 aa12.34□□□□□ -0.43
SEC13-205ENST00000397101 NUP214P35658 2090 aaPredicted RBP12.33□□□□□ -0.44
SEC13-205ENST00000397101 SCDO00767 359 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 TP53I11O14683 189 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 PPM1BO75688 479 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 UTS2O95399 124 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 IGKV1D-16P01601 117 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 CYP4B1P13584 511 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 ETS2P15036 469 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 IL7RP16871 459 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 FPR1P21462 350 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 GDF1P27539 372 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 PNLIPRP2P54317 469 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 EEF1A1P68104 462 aaKnown RBP12.33□□□□□ -0.44
SEC13-205ENST00000397101 RPP38P78345 283 aaKnown RBP12.33□□□□□ -0.44
SEC13-205ENST00000397101 LARS2Q15031 903 aaKnown RBP12.33□□□□□ -0.44
SEC13-205ENST00000397101 POU4F3Q15319 338 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.33□□□□□ -0.44
SEC13-205ENST00000397101 ZNF311Q5JNZ3 666 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 EEF1A1P5Q5VTE0 462 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 FRRS1Q6ZNA5 592 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 FKBP9P1Q75LS8 142 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 ZNF527Q8NB42 609 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 OR10G3Q8NGC4 313 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 OR52P1PQ8NH57 321 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 FAM110BQ8TC76 370 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 WDYHV1Q96HA8 205 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 UCN2Q96RP3 112 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 SECISBP2Q96T21 854 aaKnown RBP12.33□□□□□ -0.44
SEC13-205ENST00000397101 RBM24Q9BX46 236 aaKnown RBP12.33□□□□□ -0.44
SEC13-205ENST00000397101 ZNF350Q9GZX5 532 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 QRSL1Q9H0R6 528 aaKnown RBP12.33□□□□□ -0.44
SEC13-205ENST00000397101 SLC38A1Q9H2H9 487 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 ARMC7Q9H6L4 198 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 GORASP2Q9H8Y8 452 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 BCL2L10Q9HD36 194 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 NDRG3Q9UGV2 375 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 SAMD4AQ9UPU9 718 aaKnown RBP12.33□□□□□ -0.44
SEC13-205ENST00000397101 IFT52Q9Y366 437 aa12.33□□□□□ -0.44
SEC13-205ENST00000397101 ANK2Q01484 3957 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 ACOT8O14734 319 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 CASKO14936 926 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 TSPAN2O60636 221 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 ABCB7O75027 752 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 SNX4O95219 450 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 DBIP07108 87 aaKnown RBP12.32□□□□□ -0.44
SEC13-205ENST00000397101 NAGAP17050 411 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 ATP6V1B2P21281 511 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 LCN1P31025 176 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 RNF144AP50876 292 aaPredicted RBP12.32□□□□□ -0.44
SEC13-205ENST00000397101 ATP12AP54707 1039 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 FBXW4P57775 412 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 KPNB1Q14974 876 aaKnown RBP12.32□□□□□ -0.44
SEC13-205ENST00000397101 MAPK11Q15759 364 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 CYBRD1Q53TN4 286 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 MTX3Q5HYI7 312 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 LCN8Q6JVE9 175 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 CCDC80Q76M96 950 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 NUP54Q7Z3B4 507 aa12.32□□□□□ -0.44
SEC13-205ENST00000397101 ZAR1Q86SH2 424 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms