RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 VNN3Q9NY84 501 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 SAMD4AQ9UPU9 718 aaKnown RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 IGKV3D-15A0A087WSY6 115 aa9.52□□□□□ -0.88
NUP98-205ENST00000397007 PDE5AO76074 875 aa9.52□□□□□ -0.88
NUP98-205ENST00000397007 BGLAPP02818 100 aa9.52□□□□□ -0.88
NUP98-205ENST00000397007 PLA2G2AP14555 144 aa9.52□□□□□ -0.88
NUP98-205ENST00000397007 RFC3P40938 356 aa9.52□□□□□ -0.88
NUP98-205ENST00000397007 ALDH6A1Q02252 535 aaKnown RBP9.52□□□□□ -0.88
NUP98-205ENST00000397007 GTF3C1Q12789 2109 aa9.52□□□□□ -0.88
NUP98-205ENST00000397007 SLC10A1Q14973 349 aa9.52□□□□□ -0.88
NUP98-205ENST00000397007 PDK3Q15120 406 aa9.52□□□□□ -0.88
NUP98-205ENST00000397007 OR1Q1Q15612 314 aa9.52□□□□□ -0.88
NUP98-205ENST00000397007 WIPI1Q5MNZ9 446 aaPredicted RBP9.52□□□□□ -0.88
NUP98-205ENST00000397007 ENTPD8Q5MY95 495 aa9.52□□□□□ -0.88
NUP98-205ENST00000397007 GHDCQ8N2G8 530 aa9.52□□□□□ -0.88
NUP98-205ENST00000397007 LRRC75AQ8NAA5 344 aa9.52□□□□□ -0.88
NUP98-205ENST00000397007 ZNF300Q96RE9 604 aaPredicted RBP9.52□□□□□ -0.88
NUP98-205ENST00000397007 AKAP9Q99996 3911 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 A0A1B0GWA3 101 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 CLK3P49761 638 aaKnown RBP9.52□□□□□ -0.89
NUP98-205ENST00000397007 CDH12P55289 794 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 SELENBP1Q13228 472 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 GDF7Q7Z4P5 450 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 CARM1Q86X55 608 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 DOLPP1Q86YN1 238 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 GATSQ8NAP1 163 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 FAM98AQ8NCA5 519 aaKnown RBP9.52□□□□□ -0.89
NUP98-205ENST00000397007 GEMIN6Q8WXD5 167 aaKnown RBP9.52□□□□□ -0.89
NUP98-205ENST00000397007 CALHM2Q9HA72 323 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 CTPS2Q9NRF8 586 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 TAS2R10Q9NYW0 307 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 SEC14L3Q9UDX4 400 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 BAG5Q9UL15 447 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 TRAPPC4Q9Y296 219 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 ENPP4Q9Y6X5 453 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 FRS3O43559 492 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 UMPSP11172 480 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 ZNF26P17031 533 aaPredicted RBP9.52□□□□□ -0.89
NUP98-205ENST00000397007 HOXB6P17509 224 aaKnown RBP9.52□□□□□ -0.89
NUP98-205ENST00000397007 HK1P19367 917 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 PGCP20142 388 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 AQP1P29972 269 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 MSX2P35548 267 aaPredicted RBP9.52□□□□□ -0.89
NUP98-205ENST00000397007 CA7P43166 264 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 POLR2HP52434 150 aaKnown RBP9.52□□□□□ -0.89
NUP98-205ENST00000397007 SLC16A1P53985 500 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 HSF1Q00613 529 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 OR5M10Q6IEU7 315 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 RNF148Q8N7C7 305 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 PIGQQ9BRB3 760 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 PRR14Q9BWN1 585 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 SRXN1Q9BYN0 137 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 PIF1Q9H611 641 aa9.52□□□□□ -0.89
NUP98-205ENST00000397007 ZNF407Q9C0G0 2248 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 TRGV5A0A0B4J1U4 118 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 A0A0J9YW62 118 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 FAM166BA8MTA8 275 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 SHISA8B8ZZ34 492 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 BCKDKO14874 412 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 GYG2O15488 501 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 CGAP01215 116 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 ASAH2BP0C7U1 165 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 TNFRSF1BP20333 461 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 RNF144AP50876 292 aaPredicted RBP9.51□□□□□ -0.89
NUP98-205ENST00000397007 FXYD6P3P58550 94 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 NFATC3Q12968 1075 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 POU4F3Q15319 338 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 ACSF3Q4G176 576 aaPredicted RBP9.51□□□□□ -0.89
NUP98-205ENST00000397007 B3GAT1Q9P2W7 334 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 RPS6KA6Q9UK32 745 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 RALYQ9UKM9 306 aaKnown RBP9.51□□□□□ -0.89
NUP98-205ENST00000397007 ZNF814B7Z6K7 855 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 PRKD3O94806 890 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 UBTFL6P0CB48 400 aaPredicted RBP9.51□□□□□ -0.89
NUP98-205ENST00000397007 CLDN20P56880 219 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 HPCAP84074 193 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 TFF3Q07654 80 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 NSUN5P2Q63ZY6 315 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 HMBOX1Q6NT76 420 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 FAM180AQ6UWF9 173 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 WDFY1Q8IWB7 410 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 THTPAQ9BU02 230 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 TRIM2Q9C040 744 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 B4GALT7Q9UBV7 327 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 A0A1B0GTH9 108 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 A0A1W2PNV4 684 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 ZC3H12DA2A288 527 aaKnown RBP9.51□□□□□ -0.89
NUP98-205ENST00000397007 ZNF716A6NP11 495 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 IDH2P48735 452 aaKnown RBP9.51□□□□□ -0.89
NUP98-205ENST00000397007 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.51□□□□□ -0.89
NUP98-205ENST00000397007 ARHGAP11AQ6P4F7 1023 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 ULK3Q6PHR2 472 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 TEX19Q8NA77 164 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 RNF128Q8TEB7 428 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 DNAJA4Q8WW22 397 aaPredicted RBP9.51□□□□□ -0.89
NUP98-205ENST00000397007 GABARAPL1Q9H0R8 117 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 PRM3Q9NNZ6 103 aa9.51□□□□□ -0.89
NUP98-205ENST00000397007 FLNCQ14315 2725 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 H3BNH8 94 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 J3KTA2 159 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms