RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 NEU4Q8WWR8 484 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-202ENST00000396629 CIDECQ96AQ7 238 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-202ENST00000396629 BOD1Q96IK1 185 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 EGLN2Q96KS0 407 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 TMEM237Q96Q45 408 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 KCNA7Q96RP8 456 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 IQCGQ9H095 443 aaKnown RBP7.34□□□□□ -1.23
SCFD1-202ENST00000396629 RAB1BQ9H0U4 201 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 DUSP22Q9NRW4 184 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 FBXO9Q9UK97 447 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-202ENST00000396629 PCDHB10Q9UN67 800 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 SAR1BQ9Y6B6 198 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 NPIPB8E9PQR5 432 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 SULT2B1O00204 365 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 TMPRSS2O15393 492 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 MRPL33O75394 65 aaKnown RBP7.34□□□□□ -1.24
SCFD1-202ENST00000396629 WNT11O96014 354 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 DAOP14920 347 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 CREB1P16220 341 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 PGCP20142 388 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 IMPDH1P20839 514 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 RNF144AP50876 292 aaPredicted RBP7.34□□□□□ -1.24
SCFD1-202ENST00000396629 ATP12AP54707 1039 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 PRPS1P60891 318 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 ADIPOQQ15848 244 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 TIGD2Q4W5G0 525 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 AWAT1Q58HT5 328 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 TRIM46Q7Z4K8 759 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 GLCCI1Q86VQ1 547 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 PIGXQ8TBF5 258 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 CDS1Q92903 461 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 OTUB1Q96FW1 271 aaPredicted RBP7.34□□□□□ -1.24
SCFD1-202ENST00000396629 SNX18Q96RF0 628 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 ZNF747Q9BV97 191 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 QRSL1Q9H0R6 528 aaKnown RBP7.34□□□□□ -1.24
SCFD1-202ENST00000396629 PIGUQ9H490 435 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 ACSS3Q9H6R3 686 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 CA10Q9NS85 328 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 ACSS1Q9NUB1 689 aaPredicted RBP7.34□□□□□ -1.24
SCFD1-202ENST00000396629 DTNAQ9Y4J8 743 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 SPEF1Q9Y4P9 236 aa7.34□□□□□ -1.24
SCFD1-202ENST00000396629 IGHV1-18A0A0C4DH31 117 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 B4DSR2 109 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 ZNF264O43296 627 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 ZSCAN12O43309 604 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 RSL1D1O76021 490 aaKnown RBP7.33□□□□□ -1.24
SCFD1-202ENST00000396629 TAC1P20366 129 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 ATP6V1C1P21283 382 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 LIMS1P48059 325 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 KHKP50053 298 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 LCP2Q13094 533 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 CBFBQ13951 182 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 TRIP10Q15642 601 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 PDCD2Q16342 344 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-202ENST00000396629 C9orf135Q5VTT2 229 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 ANKRD26P1Q6NSI1 321 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 SZRD1Q7Z422 152 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 SPATA19Q7Z5L4 167 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 RFWD2Q8NHY2 731 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 SLC25A43Q8WUT9 341 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-202ENST00000396629 ST8SIA1Q92185 356 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 METTL2AQ96IZ6 378 aaKnown RBP7.33□□□□□ -1.24
SCFD1-202ENST00000396629 KATNB1Q9BVA0 655 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 FUT8Q9BYC5 575 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 SERINC1Q9NRX5 453 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 SLC7A10Q9NS82 523 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 PCDHB14Q9Y5E9 798 aa7.33□□□□□ -1.24
SCFD1-202ENST00000396629 DNPH1O43598 174 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 PMS2P2O95744 297 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 OR4A8P0C604 315 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 SERPINB9P50453 376 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 FOXA1P55317 472 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 SESN3P58005 492 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 TGFBR3Q03167 851 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 KIAA0040Q15053 153 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 IMPG1Q17R60 797 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 SYT14P1Q58G82 188 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 TEX35Q5T0J7 233 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 UBASH3BQ8TF42 649 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 ZHX1-C8orf76Q96EF9 292 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 FAM120BQ96EK7 910 aaKnown RBP7.32□□□□□ -1.24
SCFD1-202ENST00000396629 L3HYPDHQ96EM0 354 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 SLC38A2Q96QD8 506 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 JMJD8Q96S16 334 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 DOK1Q99704 481 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 THUMPD3Q9BV44 507 aaKnown RBP7.32□□□□□ -1.24
SCFD1-202ENST00000396629 LAT2Q9GZY6 243 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 REEP4Q9H6H4 257 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 SIRT3Q9NTG7 399 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-202ENST00000396629 ACER3Q9NUN7 267 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 UPB1Q9UBR1 384 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 HMGN2P05204 90 aaKnown RBP7.32□□□□□ -1.24
SCFD1-202ENST00000396629 INHBAP08476 426 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 IGFBP1P08833 259 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-202ENST00000396629 UBL4AP11441 157 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 PAX7P23759 505 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 MPGP29372 298 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 PHBP35232 272 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 MAGEA8P43361 318 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 PRKAA2P54646 552 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms