RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 CDKN2CP42773 168 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 DIO1P49895 249 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 KHKP50053 298 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 CLNS1AP54105 237 aaKnown RBP15.98■□□□□ 0.15
CXCL12-204ENST00000395793 WDR4P57081 412 aaKnown RBP15.98■□□□□ 0.15
CXCL12-204ENST00000395793 CHRNEQ04844 493 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 RASGEF1BQ0VAM2 473 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 EIF3MQ7L2H7 374 aaKnown RBP15.98■□□□□ 0.15
CXCL12-204ENST00000395793 LRRC34Q8IZ02 419 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 ZNF611Q8N823 705 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 ANKRD42Q8N9B4 389 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 AKAP1Q92667 903 aaKnown RBP eCLIP15.98■□□□□ 0.15
CXCL12-204ENST00000395793 NEUROG1Q92886 237 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 DNAJA3Q96EY1 480 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 INPP5KQ9BT40 448 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 CCDC106Q9BWC9 280 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 CTPS2Q9NRF8 586 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 POLE3Q9NRF9 147 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 KLHL9Q9P2J3 617 aa15.98■□□□□ 0.15
CXCL12-204ENST00000395793 MARCOQ9UEW3 520 aaPredicted RBP15.98■□□□□ 0.15
CXCL12-204ENST00000395793 ZNF500O60304 480 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-204ENST00000395793 SNUPNO95149 360 aaKnown RBP15.97■□□□□ 0.15
CXCL12-204ENST00000395793 AGR2O95994 175 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 HEXAP06865 529 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 PAX1P15863 534 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 IL32P24001 234 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 S100A3P33764 101 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 DPY19L1Q2PZI1 675 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 SYT14P1Q58G82 188 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 NCMAPQ5T1S8 102 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 ATAD3BQ5T9A4 648 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 ABLIM2Q6H8Q1 611 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 TMPPEQ6ZT21 453 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 RNF130Q86XS8 419 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 ANKFN1Q8N957 763 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 KISS1RQ969F8 398 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-204ENST00000395793 ARL5BQ96KC2 179 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 PAIP2Q9BPZ3 127 aaKnown RBP15.97■□□□□ 0.15
CXCL12-204ENST00000395793 TACO1Q9BSH4 297 aaKnown RBP15.97■□□□□ 0.15
CXCL12-204ENST00000395793 HDHD5Q9BXW7 423 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 SLC38A1Q9H2H9 487 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 WDR55Q9H6Y2 383 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-204ENST00000395793 ZNF701Q9NV72 531 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-204ENST00000395793 BTNL2Q9UIR0 455 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 SLC35A3Q9Y2D2 325 aa15.97■□□□□ 0.15
CXCL12-204ENST00000395793 CSPG4Q6UVK1 2322 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 AP3D1O14617 1153 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 SMAD7O15105 426 aaKnown RBP15.96■□□□□ 0.15
CXCL12-204ENST00000395793 LYZL6O75951 148 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 CHRM4P08173 479 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 EPHA3P29320 983 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 RYKP34925 604 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 CHI3L1P36222 383 aaPredicted RBP15.96■□□□□ 0.15
CXCL12-204ENST00000395793 ITGADQ13349 1161 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 P2RY6Q15077 328 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 SYPL1Q16563 259 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 GPAT3Q53EU6 434 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 Q6ZT83 130 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 BHLHA15Q7RTS1 189 aaPredicted RBP15.96■□□□□ 0.15
CXCL12-204ENST00000395793 VPS37AQ8NEZ2 397 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 TMEM171Q8WVE6 324 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 OIT3Q8WWZ8 545 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 TMEM234Q8WY98 164 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 CNOT9Q92600 299 aaKnown RBP15.96■□□□□ 0.15
CXCL12-204ENST00000395793 POTEKPQ9BYX7 375 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 OR11A1Q9GZK7 315 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 RNF115Q9Y4L5 304 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 GPR45Q9Y5Y3 372 aa15.96■□□□□ 0.15
CXCL12-204ENST00000395793 GOLGA8QA0A0J9YX86 632 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 GOLGA8OA6NCC3 632 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 CCDC154A6NI56 674 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 ZNF716A6NP11 495 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 ZNF724A8MTY0 619 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 GOLGA8NF8WBI6 632 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 SULT2B1O00204 365 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 RAMP1O60894 148 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 SNNO75324 88 aaPredicted RBP15.95■□□□□ 0.14
CXCL12-204ENST00000395793 GSNP06396 782 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 COX5AP20674 150 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 IGHV1-2P23083 117 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 NTF4P34130 210 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 KCNJ10P78508 379 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 CAPRIN1Q14444 709 aaKnown RBP15.95■□□□□ 0.14
CXCL12-204ENST00000395793 MAPK11Q15759 364 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 COX20Q5RI15 118 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 ADAM5Q6NVV9 412 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 KIRREL3Q8IZU9 778 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 KBTBD8Q8NFY9 601 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 ZNF563Q8TA94 476 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 PIWIL2Q8TC59 973 aaKnown RBP15.95■□□□□ 0.14
CXCL12-204ENST00000395793 SLC25A43Q8WUT9 341 aaPredicted RBP15.95■□□□□ 0.14
CXCL12-204ENST00000395793 EXOSC3Q9NQT5 275 aaKnown RBP15.95■□□□□ 0.14
CXCL12-204ENST00000395793 SERINC1Q9NRX5 453 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 SLC6A13Q9NSD5 602 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 CHRNA9Q9UGM1 479 aa15.95■□□□□ 0.14
CXCL12-204ENST00000395793 IGKV3D-15A0A087WSY6 115 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 TMEM120BA0PK00 339 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 DPRXA6NFQ7 191 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 CLOCKO15516 846 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 CNOT4O95628 575 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms