RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 OR2L2Q8NH16 312 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 FCAMRQ8WWV6 532 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 ZNF707Q96C28 371 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-202ENST00000394820 BPIFA2Q96DR5 249 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 S100A16Q96FQ6 103 aaKnown RBP12.28□□□□□ -0.44
NFKB1-202ENST00000394820 HPF1Q9NWY4 346 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 NPAP1Q9NZP6 1156 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 ADAM18Q9Y3Q7 739 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 PCDHGB7Q9Y5F8 929 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 AP1M2Q9Y6Q5 423 aa12.28□□□□□ -0.44
NFKB1-202ENST00000394820 SHISA3A0PJX4 238 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 TRABD2BA6NFA1 517 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 RGS13O14921 159 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 AGPAT2O15120 278 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 PITPNAQ00169 270 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 OPCMLQ14982 345 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 PYHIN1Q6K0P9 492 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 CREB3L2Q70SY1 520 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 IKBIPQ70UQ0 350 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 COMTD1Q86VU5 262 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 JAZF1Q86VZ6 243 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 OOSP2Q86WS3 158 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 ACOT11Q8WXI4 607 aaPredicted RBP12.27□□□□□ -0.44
NFKB1-202ENST00000394820 HCAR1Q9BXC0 346 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 DPEP2Q9H4A9 486 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 NOX3Q9HBY0 568 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 KCNN3Q9UGI6 736 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 ING1Q9UK53 422 aaPredicted RBP12.27□□□□□ -0.44
NFKB1-202ENST00000394820 MAFFQ9ULX9 164 aa12.27□□□□□ -0.44
NFKB1-202ENST00000394820 A0A1W2PR48 441 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 C5orf51A6NDU8 294 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 OR8G3PP0DMU2 310 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 CMPK1P30085 196 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 GNALP38405 381 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 FXYD6P3P58550 94 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 TSPAN31Q12999 210 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 SRSF5Q13243 272 aaKnown RBP12.27□□□□□ -0.45
NFKB1-202ENST00000394820 PCGF3Q3KNV8 242 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 GDF7Q7Z4P5 450 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 LRRC28Q86X40 367 aaPredicted RBP12.27□□□□□ -0.45
NFKB1-202ENST00000394820 ARMC10Q8N2F6 343 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 OR56A1Q8NGH5 318 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 TMEM239Q8WW34 195 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 TSACCQ96A04 125 aaPredicted RBP12.27□□□□□ -0.45
NFKB1-202ENST00000394820 ZNF514Q96K75 400 aaPredicted RBP12.27□□□□□ -0.45
NFKB1-202ENST00000394820 SPACA7Q96KW9 195 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 RPP25Q9BUL9 199 aaKnown RBP12.27□□□□□ -0.45
NFKB1-202ENST00000394820 SLC6A15Q9H2J7 730 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 CENPMQ9NSP4 180 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 SPINT1O43278 529 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 ZNF888P0CJ79 500 aaPredicted RBP12.27□□□□□ -0.45
NFKB1-202ENST00000394820 RAD52P43351 418 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 VASPP50552 380 aaPredicted RBP12.27□□□□□ -0.45
NFKB1-202ENST00000394820 SHC2P98077 582 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 ZNHIT3Q15649 155 aaPredicted RBP12.27□□□□□ -0.45
NFKB1-202ENST00000394820 PUS10Q3MIT2 529 aaKnown RBP12.27□□□□□ -0.45
NFKB1-202ENST00000394820 TRMT12Q53H54 448 aaKnown RBP12.27□□□□□ -0.45
NFKB1-202ENST00000394820 QSOX2Q6ZRP7 698 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 LAS2Q8IYD9 372 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 NRSN1Q8IZ57 195 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 INSM2Q96T92 566 aaPredicted RBP12.27□□□□□ -0.45
NFKB1-202ENST00000394820 MS4A8Q9BY19 250 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 MED11Q9P086 117 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 UNC13CQ8NB66 2214 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 PLXNA4Q9HCM2 1894 aa12.27□□□□□ -0.45
NFKB1-202ENST00000394820 ALG10BQ5I7T1 473 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 MRPL2Q5T653 305 aaKnown RBP12.26□□□□□ -0.45
NFKB1-202ENST00000394820 PAQR7Q86WK9 346 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 FBLIM1Q8WUP2 373 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 SIDT1Q9NXL6 827 aaKnown RBP12.26□□□□□ -0.45
NFKB1-202ENST00000394820 SAGE1Q9NXZ1 904 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 SLC39A1Q9NY26 324 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 TRDV1A0A1B0GX56 115 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 A0A1W2PQU0 124 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 EEF1E1-BLOC1S5C9J1V9 151 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 CDC42EP2O14613 210 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 CHP2O43745 196 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 CREBL2O60519 120 aaPredicted RBP12.26□□□□□ -0.45
NFKB1-202ENST00000394820 SEMA7AO75326 666 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 F13BP05160 661 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 TBXA2RP21731 343 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 HIST1H1TP22492 207 aaPredicted RBP12.26□□□□□ -0.45
NFKB1-202ENST00000394820 HLA-DMAP28067 261 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 GJA4P35212 333 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 SORDQ00796 357 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 C1orf61Q13536 156 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 STK11Q15831 433 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 OR5M10Q6IEU7 315 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 PLPP6Q8IY26 295 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 OR4K14Q8NGD5 310 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 OR52I2Q8NH67 350 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 DUSP19Q8WTR2 217 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 CNRIP1Q96F85 164 aaPredicted RBP12.26□□□□□ -0.45
NFKB1-202ENST00000394820 RNF170Q96K19 258 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 HS6ST2Q96MM7 605 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 NMNAT3Q96T66 252 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 ARHGAP9Q9BRR9 750 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 TAPBPLQ9BX59 468 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 NIPAL2Q9H841 368 aa12.26□□□□□ -0.45
NFKB1-202ENST00000394820 POLR1DQ9Y2S0 133 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms