RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 SIRPAP78324 504 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 E2F1Q01094 437 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 KIR2DS3Q14952 304 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 AGBL4Q5VU57 503 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 FAAH2Q6GMR7 532 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 FBXL6Q8N531 539 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 SNX33Q8WV41 574 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 LCN9Q8WX39 176 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 RAB40AQ8WXH6 277 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 NRTNQ99748 197 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 C20orf85Q9H1P6 137 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 DLL4Q9NR61 685 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 SLCO1C1Q9NYB5 712 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 KLHL9Q9P2J3 617 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 ST6GALNAC2Q9UJ37 374 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 SERTAD3Q9UJW9 196 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 ZMIZ1Q9ULJ6 1067 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 GPSM3Q9Y4H4 160 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 OR1A2Q9Y585 309 aa9.29□□□□□ -0.92
UBE2D3-208ENST00000394803 NOTCH4Q99466 2003 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 GXYLT2A0PJZ3 443 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 M0R233 179 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 PTP4A3O75365 173 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 LYPD3O95274 346 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 LDOC1O95751 146 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 ATP1B1P05026 303 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 CD3GP09693 182 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 CCL5P13501 91 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 CPN1P15169 458 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 POLR2CP19387 275 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 PSMB1P20618 241 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 HTR2AP28223 471 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 DRD3P35462 400 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 SRP9P49458 86 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 OR12D2P58182 307 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 FXYD6P3P58550 94 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 CAMK2DQ13557 499 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 CRMP1Q14194 572 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 NUMA1Q14980 2115 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 SLC25A35Q3KQZ1 300 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 CDONQ4KMG0 1287 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 EXOSC6Q5RKV6 272 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 GRAMD2AQ8IUY3 354 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 SPICQ8N5J4 248 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 OR13C2Q8NGS9 318 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 PFN4Q8NHR9 129 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 POF1BQ8WVV4 589 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 FCAMRQ8WWV6 532 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 NECTIN4Q96NY8 510 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 MACROD1Q9BQ69 325 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 GSDMCQ9BYG8 508 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 RSPH9Q9H1X1 276 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 MBNL1Q9NR56 388 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 MAT2BQ9NZL9 334 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 RPS6KB2Q9UBS0 482 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 KIF25Q9UIL4 384 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 MOSPD1Q9UJG1 213 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 MRPS7Q9Y2R9 242 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 SLC22A7Q9Y694 548 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 LOC105369274A0A096LPK9 316 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 ARPC4-TTLL3A0A0A6YYG9 625 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 A0A1W2PRG6 482 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 I3L521 148 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 ZNF593O00488 134 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 TPD52L2O43399 206 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 PPM1BO75688 479 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 KRT33AO76009 404 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 NDUFB2O95178 105 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 STATHP02808 62 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 CEACAM5P06731 702 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 MRPL3P09001 348 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 CALCBP10092 127 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 EPCAMP16422 314 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 ATF1P18846 271 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 POU3F3P20264 500 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 DRD5P21918 477 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 MAPK3P27361 379 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 FAUP35544 74 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 GDNFP39905 211 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 SCAND1P57086 179 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 DGCR2P98153 550 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 TAGLNQ01995 201 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 FGFBP1Q14512 234 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 PON3Q15166 354 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 ZNF550Q7Z398 422 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 COMMD7Q86VX2 200 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 OR4N4Q8N0Y3 316 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 UXS1Q8NBZ7 420 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 HSD17B8Q92506 261 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 NSMAFQ92636 917 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 RSC1A1Q92681 617 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 THRSPQ92748 146 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 LCORQ96JN0 433 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 NANSQ9NR45 359 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 WBP1LQ9NX94 342 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 DAPP1Q9UN19 280 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 ETV7Q9Y603 341 aa9.28□□□□□ -0.92
UBE2D3-208ENST00000394803 A0A0B4J2E0 115 aa9.27□□□□□ -0.93
UBE2D3-208ENST00000394803 TRBV2A0A0J9YWF9 115 aa9.27□□□□□ -0.93
UBE2D3-208ENST00000394803 A0A1B0GX12 115 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms