RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 FOXN4Q96NZ1 517 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 APOOQ9BUR5 198 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 SYNDIG1Q9H7V2 258 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 IL21RQ9HBE5 538 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 COMMD9Q9P000 198 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 HNRNPA1P09651 372 aaKnown RBP eCLIP14.98□□□□□ -0.01
PCDH1-203ENST00000394536 CPMP14384 443 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 PRKAR1BP31321 381 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 GDNFP39905 211 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 PXNP49023 591 aaPredicted RBP14.98□□□□□ -0.01
PCDH1-203ENST00000394536 CLDN20P56880 219 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.98□□□□□ -0.01
PCDH1-203ENST00000394536 CREB3L2Q70SY1 520 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 CDRT4Q8N9R6 151 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 OR2L8Q8NGY9 312 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 PMEPA1Q969W9 287 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 SDF2Q99470 211 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 COMMD4Q9H0A8 199 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 Q9N2J8 555 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 WASH6PQ9NQA3 447 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 FLVCR2Q9UPI3 526 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 KRT33AO76009 404 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 SBK2P0C263 348 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 DPTQ07507 201 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 ARHGAP11AQ6P4F7 1023 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 UBE3DQ7Z6J8 389 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 MORN4Q8NDC4 146 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 MOSPD2Q8NHP6 518 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 GAL3ST3Q96A11 431 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 SGTBQ96EQ0 304 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCDH1-203ENST00000394536 C20orf141Q9NUB4 165 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 CBLCQ9ULV8 474 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 RDH16O75452 317 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 PAPLNO95428 1278 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 VEGFCP49767 419 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 DUSP2Q05923 314 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 TRAM1Q15629 374 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 DUSP6Q16828 381 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 SCGB2B2Q4G0G5 96 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 SLC22A10Q63ZE4 541 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 LEG1Q6P5S2 330 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 APOOLQ6UXV4 268 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 CSNK1A1LQ8N752 337 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 PEX11GQ96HA9 241 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 SPACA7Q96KW9 195 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 NMNAT3Q96T66 252 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 TIMP1P01033 207 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 TACSTD2P09758 323 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 FGF9P31371 208 aaPredicted RBP14.97□□□□□ -0.01
PCDH1-203ENST00000394536 CAPZA2P47755 286 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 FAAP20Q6NZ36 180 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 ADAMTSL4Q6UY14 1074 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 BADQ92934 168 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 HHIPQ96QV1 700 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 FGF22Q9HCT0 170 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 MED17Q9NVC6 651 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 TESQ9UGI8 421 aaKnown RBP14.97□□□□□ -0.01
PCDH1-203ENST00000394536 LAMP5Q9UJQ1 280 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 BAIAP2Q9UQB8 552 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 POLR1DQ9Y2S0 133 aa14.97□□□□□ -0.01
PCDH1-203ENST00000394536 PTPRDP23468 1912 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 A0A0A6YYD5 115 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 TRABD2BA6NFA1 517 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 NDUFB2O95178 105 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 PROS1P07225 676 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 GJA4P35212 333 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 AKR1D1P51857 326 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 PRMT2P55345 433 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 P2RX3P56373 397 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 SKP1P63208 163 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 RPL13AP3Q6NVV1 102 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 TMEM64Q6YI46 380 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 LRRC3BQ96PB8 259 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 ABHD1Q96SE0 405 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 PNO1Q9NRX1 252 aaKnown RBP14.96□□□□□ -0.01
PCDH1-203ENST00000394536 MAN2C1Q9NTJ4 1040 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 IL20Q9NYY1 176 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 B4DGG1 531 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 H0Y8X5 98 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 LANCL1O43813 399 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 TRIM3O75382 744 aaPredicted RBP14.96□□□□□ -0.01
PCDH1-203ENST00000394536 RBBP9O75884 186 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 AKIRIN2Q53H80 203 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 ESCO2Q56NI9 601 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 TANGO2Q6ICL3 276 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 NIPAL3Q6P499 406 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 KANSL1Q7Z3B3 1105 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 SLC35F2Q8IXU6 374 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 ZNF511Q8NB15 262 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 CCL4L1Q8NHW4 92 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 DIO2Q92813 273 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 MED18Q9BUE0 208 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 TRIM2Q9C040 744 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 B3GNT4Q9C0J1 378 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 C11orf49Q9H6J7 331 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 EXO5Q9H790 373 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 PRDM7Q9NQW5 492 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 FBXO34Q9NWN3 711 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 FARSAQ9Y285 508 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms