RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 RNF122Q9H9V4 155 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 MYOFQ9NZM1 2061 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 PLXNA2O75051 1894 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 CRYBA1P05813 215 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 FBP1P09467 338 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 CLTBP09497 229 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 FURINP09958 794 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 NPPBP16860 134 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 POM121L1PQ3SYA9 428 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 RNASE12Q5GAN4 147 aaKnown RBP17.5■□□□□ 0.39
HOXC6-202ENST00000394331 CXXC5Q7LFL8 322 aaKnown RBP17.5■□□□□ 0.39
HOXC6-202ENST00000394331 COMMD6Q7Z4G1 85 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 SERPINA12Q8IW75 414 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 PPCDCQ96CD2 204 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 RCE1Q9Y256 329 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 GPR52Q9Y2T5 361 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 UQCRC2P22695 453 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 HSD17B2P37059 387 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 STARP49675 285 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 SLC25A35Q3KQZ1 300 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 CFAP206Q8IYR0 622 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 GPA33Q99795 319 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 SGPP1Q9BX95 441 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 GSDMCQ9BYG8 508 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 DMRT3Q9NQL9 472 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 NIT2Q9NQR4 276 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 FXYD6-FXYD2A0A087WZ82 144 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 SPDEFO95238 335 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 IGF2P01344 180 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 ACP5P13686 325 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 FAM74A1Q5RGS3 127 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 NHLRC1Q6VVB1 395 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 SLC16A13Q7RTY0 426 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 OR4D11Q8NGI4 311 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 SLC38A5Q8WUX1 472 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 DTD2Q96FN9 168 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 CRB3Q9BUF7 120 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 RSPO3Q9BXY4 272 aaPredicted RBP17.49■□□□□ 0.39
HOXC6-202ENST00000394331 FXYD6Q9H0Q3 95 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 SLC38A1Q9H2H9 487 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 TRIM36Q9NQ86 728 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 MAN2C1Q9NTJ4 1040 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 WNT6Q9Y6F9 365 aa17.49■□□□□ 0.39
HOXC6-202ENST00000394331 TRAV1-2A0A0B4J238 106 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 OR6C68A6NDL8 312 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 EFCAB7A8K855 629 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 GABARAPH6UMI1 98 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 PLPP2O43688 288 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 CSF2RAP15509 400 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 MNX1P50219 401 aaPredicted RBP17.48■□□□□ 0.39
HOXC6-202ENST00000394331 TSTA3Q13630 321 aaPredicted RBP17.48■□□□□ 0.39
HOXC6-202ENST00000394331 ZNF658BQ4V348 819 aaPredicted RBP17.48■□□□□ 0.39
HOXC6-202ENST00000394331 LIN54Q6MZP7 749 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 IQCHQ86VS3 1027 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 OR9A1PQ8NGU1 263 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 AUNIPQ9H7T9 357 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 UCK1Q9HA47 277 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 F5H5P2 479 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 STX11O75558 287 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 RHOP08100 348 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 PAX6P26367 422 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 PTGFRP43088 359 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 PARS2Q7L3T8 475 aaKnown RBP17.48■□□□□ 0.39
HOXC6-202ENST00000394331 CBLN2Q8IUK8 224 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 OR5AK3PQ8NH89 298 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 UBE2E3Q969T4 207 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 MYNNQ9NPC7 610 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 SIRT4Q9Y6E7 314 aaPredicted RBP17.48■□□□□ 0.39
HOXC6-202ENST00000394331 LTBP2Q14767 1821 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 C5orf52A6NGY3 159 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 NDUFB6O95139 128 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 RAB5BP61020 215 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 RNF212Q495C1 297 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 FAM83HQ6ZRV2 1179 aaPredicted RBP17.48■□□□□ 0.39
HOXC6-202ENST00000394331 FAM122BQ7Z309 247 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 RBM45Q8IUH3 476 aaKnown RBP17.48■□□□□ 0.39
HOXC6-202ENST00000394331 RELL2Q8NC24 303 aaPredicted RBP17.48■□□□□ 0.39
HOXC6-202ENST00000394331 C16orf78Q8WTQ4 265 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 EDARADDQ8WWZ3 215 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 MS4A4EQ96PG1 132 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 FNDC11Q9BVV2 318 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 MFFQ9GZY8 342 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 MIOXQ9UGB7 285 aa17.48■□□□□ 0.39
HOXC6-202ENST00000394331 UBE2QL1A1L167 161 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 KHDRBS3O75525 346 aaKnown RBP17.47■□□□□ 0.39
HOXC6-202ENST00000394331 TGFB1P01137 390 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 ATP1B1P05026 303 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 ST8SIA6P61647 398 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 RPS26P11Q5JNZ5 115 aaPredicted RBP17.47■□□□□ 0.39
HOXC6-202ENST00000394331 UBE2NLQ5JXB2 153 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 GANCQ8TET4 914 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 WDR89Q96FK6 387 aaPredicted RBP17.47■□□□□ 0.39
HOXC6-202ENST00000394331 TMEM19Q96HH6 336 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 PAPOLGQ9BWT3 736 aaKnown RBP17.47■□□□□ 0.39
HOXC6-202ENST00000394331 PBX4Q9BYU1 374 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 EGLN3Q9H6Z9 239 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 SLC22A11Q9NSA0 550 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 IRAK3Q9Y616 596 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 HELZP42694 1942 aaKnown RBP17.47■□□□□ 0.39
HOXC6-202ENST00000394331 A0A0D9SG52 128 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms