RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ACKR3P25106 362 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 IL3RAP26951 378 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 SHMT2P34897 504 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 SAMD7Q7Z3H4 446 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 ASGR2P07307 311 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 MAOBP27338 520 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 DPP4P27487 766 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 RCAN2Q14206 197 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 ZFP41Q8N8Y5 198 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 OR2M3Q8NG83 312 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 DTLQ9NZJ0 730 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 OARD1Q9Y530 152 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 DLX3O60479 287 aa12.65□□□□□ -0.39
USP49-203ENST00000394253 AREGP15514 252 aa12.65□□□□□ -0.39
USP49-203ENST00000394253 RPS15AP62244 130 aaKnown RBP12.65□□□□□ -0.39
USP49-203ENST00000394253 MTURNQ8N3F0 131 aa12.65□□□□□ -0.39
USP49-203ENST00000394253 BPIFCQ8NFQ6 507 aa12.65□□□□□ -0.39
USP49-203ENST00000394253 SFT2D1Q8WV19 159 aa12.65□□□□□ -0.39
USP49-203ENST00000394253 MYADMQ96S97 322 aa12.65□□□□□ -0.39
USP49-203ENST00000394253 C12orf10Q9HB07 376 aa12.65□□□□□ -0.39
USP49-203ENST00000394253 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.65□□□□□ -0.396e-7■■■■□ 25.9
USP49-203ENST00000394253 TTC24A2A3L6 582 aaPredicted RBP12.64□□□□□ -0.39
USP49-203ENST00000394253 PDGFBP01127 241 aaPredicted RBP12.64□□□□□ -0.39
USP49-203ENST00000394253 HLA-FP30511 346 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 BRCC3P46736 316 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 PLCXD3Q63HM9 321 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 RPL7L1Q6DKI1 246 aaKnown RBP12.64□□□□□ -0.39
USP49-203ENST00000394253 NDUFAF7Q7L592 441 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 FBXO22Q8NEZ5 403 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 CABLES2Q9BTV7 478 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 SLAMF7Q9NQ25 335 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 PRTFDC1Q9NRG1 225 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 MAFBQ9Y5Q3 323 aaPredicted RBP12.64□□□□□ -0.39
USP49-203ENST00000394253 SOCS5O75159 536 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 DNAJC19Q96DA6 116 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 SLC2A13Q96QE2 648 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 UCK1Q9HA47 277 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 RNF11Q9Y3C5 154 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 TRAPPC2LH3BP13 241 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 HLA-DQB2P05538 268 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 TIA1P31483 386 aaKnown RBP eCLIP12.64□□□□□ -0.39
USP49-203ENST00000394253 C6orf89Q6UWU4 347 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 OR56B1Q8NGI3 324 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 PXYLP1Q8TE99 480 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 BORCS6Q96GS4 357 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 CTDSP1Q9GZU7 261 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 OR51I2Q9H344 312 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 ETV7Q9Y603 341 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 ADGRB1O14514 1584 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 PDGFAP04085 211 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 C8orf89P0DMQ9 161 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 B4GALT6Q9UBX8 382 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 GMEB2Q9UKD1 530 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 ALKQ9UM73 1620 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 STC2O76061 302 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 ZNF728P0DKX0 622 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 PIGFQ07326 219 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 FAM182BQ5T319 152 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 RAB8BQ92930 207 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 PCED1BQ96HM7 432 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 SLC25A21Q9BQT8 299 aaPredicted RBP12.64□□□□□ -0.39
USP49-203ENST00000394253 USP2O75604 605 aaPredicted RBP12.64□□□□□ -0.39
USP49-203ENST00000394253 TUSC2O75896 110 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 ADH1BP00325 375 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 OPCMLQ14982 345 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 PIM3Q86V86 326 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 PARP16Q8N5Y8 322 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 APH1BQ8WW43 257 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 FEVQ99581 238 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 RNF24Q9Y225 148 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 LOC730098B7Z3J9 87 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 CFIP05156 583 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 BMP2P12643 396 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 DRD2P14416 443 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 TMEM11P17152 192 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 ADCYAP1R1P41586 468 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 WDR4P57081 412 aaKnown RBP12.64□□□□□ -0.39
USP49-203ENST00000394253 LCN8Q6JVE9 175 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 SLC24A5Q71RS6 500 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 CATSPERDQ86XM0 798 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 CPNE8Q86YQ8 564 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 OR6V1Q8N148 313 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 CPXM2Q8N436 756 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 NETO2Q8NC67 525 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 JOSD2Q8TAC2 188 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 MED18Q9BUE0 208 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 RNF208Q9H0X6 261 aa12.64□□□□□ -0.39
USP49-203ENST00000394253 LOC102724200A0A096LPH7 203 aaPredicted RBP12.63□□□□□ -0.39
USP49-203ENST00000394253 SLC6A8P48029 635 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 CXCL17Q6UXB2 119 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.63□□□□□ -0.39
USP49-203ENST00000394253 ADGRF3Q8IZF5 1079 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 AKR7LQ8NHP1 331 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 CHRDQ9H2X0 955 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 KCNG2Q9UJ96 466 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 STC1P52823 247 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.39
USP49-203ENST00000394253 LTBQ06643 244 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 CCDC116Q8IYX3 515 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms