RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MCHR1Q99705 422 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 RNF122Q9H9V4 155 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 OSGIN1Q9UJX0 560 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 CHD8Q9HCK8 2581 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 SPTBN2O15020 2390 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 TRGV5A0A0B4J1U4 118 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 A0A1B0GWA3 101 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 DHRS12A0PJE2 317 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 OR2M5A3KFT3 312 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 C17orf51A8MQB3 221 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 VLDLRP98155 873 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 FOXF1Q12946 379 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 PDK3Q15120 406 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 CYP4Z1Q86W10 505 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 PM20D2Q8IYS1 436 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 WDYHV1Q96HA8 205 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 EPYCQ99645 322 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 GP6Q9HCN6 339 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 SPRR3Q9UBC9 169 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 SLC13A4Q9UKG4 626 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 IGKV1D-42A0A075B6H8 117 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 LOC102725191A0A1B0GVB3 256 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 M0R3H8 397 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 TFECO14948 347 aaPredicted RBP11.97□□□□□ -0.49
USP44-202ENST00000393091 TCN1P20061 433 aaPredicted RBP11.97□□□□□ -0.49
USP44-202ENST00000393091 ANKDD1AQ495B1 522 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 ARHGAP11AQ6P4F7 1023 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 GDF7Q7Z4P5 450 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 GALNT11Q8NCW6 608 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 STOML1Q9UBI4 398 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 CHRNA9Q9UGM1 479 aa11.97□□□□□ -0.49
USP44-202ENST00000393091 MAP1BP46821 2468 aaKnown RBP11.97□□□□□ -0.49
USP44-202ENST00000393091 C2orf72A6NCS6 295 aa11.96□□□□□ -0.49
USP44-202ENST00000393091 B8ZZF3 427 aa11.96□□□□□ -0.49
USP44-202ENST00000393091 BMP7P18075 431 aa11.96□□□□□ -0.49
USP44-202ENST00000393091 GCKP35557 465 aa11.96□□□□□ -0.49
USP44-202ENST00000393091 ST3GAL3Q11203 375 aa11.96□□□□□ -0.49
USP44-202ENST00000393091 SF3B4Q15427 424 aaKnown RBP eCLIP11.96□□□□□ -0.49
USP44-202ENST00000393091 ZNF843Q8N446 348 aa11.96□□□□□ -0.49
USP44-202ENST00000393091 GATSQ8NAP1 163 aa11.96□□□□□ -0.49
USP44-202ENST00000393091 SLC41A3Q96GZ6 507 aa11.96□□□□□ -0.49
USP44-202ENST00000393091 OSBPL10Q9BXB5 764 aa11.96□□□□□ -0.49
USP44-202ENST00000393091 CALHM2Q9HA72 323 aa11.96□□□□□ -0.49
USP44-202ENST00000393091 PHF3Q92576 2039 aaKnown RBP11.96□□□□□ -0.49
USP44-202ENST00000393091 ATMQ13315 3056 aa11.96□□□□□ -0.49
USP44-202ENST00000393091 NINQ8N4C6 2090 aa11.96□□□□□ -0.49
USP44-202ENST00000393091 AHRRA9YTQ3 701 aa11.96□□□□□ -0.5
USP44-202ENST00000393091 HNRNPRO43390 633 aaKnown RBP11.96□□□□□ -0.5
USP44-202ENST00000393091 GKN3PP0CG01 181 aa11.96□□□□□ -0.5
USP44-202ENST00000393091 FCGR1AP12314 374 aa11.96□□□□□ -0.5
USP44-202ENST00000393091 PCYT1AP49585 367 aa11.96□□□□□ -0.5
USP44-202ENST00000393091 COPZ1P61923 177 aa11.96□□□□□ -0.5
USP44-202ENST00000393091 PMP22Q01453 160 aa11.96□□□□□ -0.5
USP44-202ENST00000393091 ESPNLQ6ZVH7 1005 aa11.96□□□□□ -0.5
USP44-202ENST00000393091 FAM57AQ8TBR7 257 aa11.96□□□□□ -0.5
USP44-202ENST00000393091 SERINC1Q9NRX5 453 aa11.96□□□□□ -0.5
USP44-202ENST00000393091 ZNF175Q9Y473 711 aa11.96□□□□□ -0.5
USP44-202ENST00000393091 LIPGQ9Y5X9 500 aa11.96□□□□□ -0.5
USP44-202ENST00000393091 TMED7-TICAM2A0A0A6YYA0 188 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 TMEM72A0PK05 275 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 A8MVM7 634 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 FTCDNL1E5RQL4 147 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 H3BNX3 289 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 KLF4O43474 513 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 CELA3AP09093 270 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 MSX2P35548 267 aaPredicted RBP11.95□□□□□ -0.5
USP44-202ENST00000393091 AGFG1P52594 562 aaKnown RBP11.95□□□□□ -0.5
USP44-202ENST00000393091 CDH12P55289 794 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 EGR4Q05215 589 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 CHRNB3Q05901 458 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 RBM45Q8IUH3 476 aaKnown RBP11.95□□□□□ -0.5
USP44-202ENST00000393091 ADAMTS16Q8TE57 1224 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 SARAFQ96BY9 339 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 TIMP4Q99727 224 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 GABARAPL1Q9H0R8 117 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 DENND2DQ9H6A0 471 aaPredicted RBP11.95□□□□□ -0.5
USP44-202ENST00000393091 RIMS3Q9UJD0 308 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 TMED7Q9Y3B3 224 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 SPENQ96T58 3664 aaKnown RBP11.95□□□□□ -0.5
USP44-202ENST00000393091 G3V3Y1 287 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 FKBP6O75344 327 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 TACR3P29371 465 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 H3F3AP84243 136 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 PRKCDQ05655 676 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 TRAM2Q15035 370 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 ATP6AP1Q15904 470 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 C1orf146Q5VVC0 180 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 CD300LDQ6UXZ3 194 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 ZDHHC21Q8IVQ6 265 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 MFSD8Q8NHS3 518 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 ABTB1Q969K4 478 aaPredicted RBP11.95□□□□□ -0.5
USP44-202ENST00000393091 DDIT4LQ96D03 193 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 PTDSS2Q9BVG9 487 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 CTPS2Q9NRF8 586 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 MGAQ8IWI9 3026 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 NBEAQ8NFP9 2946 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 CD8B2A6NJW9 211 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 WDR1O75083 606 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 CYP7B1O75881 506 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 MT-ATP6P00846 226 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms