RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 SLIRPQ9GZT3 109 aaKnown RBP13.79□□□□□ -0.2
SNX2-201ENST00000379516 FN3KQ9H479 309 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 SMOC1Q9H4F8 434 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 EXOSC3Q9NQT5 275 aaKnown RBP13.79□□□□□ -0.2
SNX2-201ENST00000379516 CMC2Q9NRP2 79 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 ICAM5Q9UMF0 924 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 ADAMTS9Q9P2N4 1935 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 TMEM221A6NGB7 291 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 ELOA3DA6NLF2 546 aaPredicted RBP13.78□□□□□ -0.2
SNX2-201ENST00000379516 LRRN3E7EW58 273 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 M0R296 226 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 TSPAN2O60636 221 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 PPP1R3DO95685 299 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 SYPP08247 313 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 ABCD3P28288 659 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 NOS3P29474 1203 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 LCN1P31025 176 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 DUSP3P51452 185 aaPredicted RBP13.78□□□□□ -0.2
SNX2-201ENST00000379516 WNT4P56705 351 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 FHL1Q13642 323 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 ELOA3BQ3SY89 546 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 OR2G6Q5TZ20 316 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 B3GLCTQ6Y288 498 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 OVCH1Q7RTY7 1134 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 LHFPL3Q86UP9 236 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 SLC15A4Q8N697 577 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 LRRC17Q8N6Y2 441 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 KBTBD8Q8NFY9 601 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 ELOA3Q8NG57 546 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 BORCS5Q969J3 196 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 HSPBAP1Q96EW2 488 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 VMP1Q96GC9 406 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 MESP1Q9BRJ9 268 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 TECTAO75443 2155 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 VPS13AQ96RL7 3174 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 TMEM129A0AVI4 362 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 PRR23D1E9PI22 279 aaPredicted RBP13.78□□□□□ -0.2
SNX2-201ENST00000379516 WWP2O00308 870 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 GMFGO60234 142 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 ALOX12BO75342 701 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 PPM1BO75688 479 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 PRR23D2P0DMB1 279 aaPredicted RBP13.78□□□□□ -0.2
SNX2-201ENST00000379516 SLC6A6P31641 620 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 SLC9A3P48764 834 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 LIMK1P53667 647 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNX2-201ENST00000379516 LIPKQ5VXJ0 399 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 NIPAL3Q6P499 406 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 MEPCEQ7L2J0 689 aaKnown RBP13.78□□□□□ -0.2
SNX2-201ENST00000379516 MARCH3Q86UD3 253 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 CROCCP3Q8IVE0 287 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 ZNF441Q8N8Z8 693 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 OR9Q1Q8NGQ5 310 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 ZNF563Q8TA94 476 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 METTL21AQ8WXB1 218 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 GATAD2BQ8WXI9 593 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 RTN4RQ9BZR6 473 aa13.78□□□□□ -0.2
SNX2-201ENST00000379516 EXOGQ9Y2C4 368 aaKnown RBP13.78□□□□□ -0.2
SNX2-201ENST00000379516 ZC3H12DA2A288 527 aaKnown RBP13.77□□□□□ -0.21
SNX2-201ENST00000379516 RIIAD1A6NNX1 92 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 GPX5O75715 221 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 LIMS3P0CW19 117 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 LIMS4P0CW20 117 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 PNMTP11086 282 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 PAICSP22234 425 aaKnown RBP13.77□□□□□ -0.21
SNX2-201ENST00000379516 PSMA1P25786 263 aaKnown RBP13.77□□□□□ -0.21
SNX2-201ENST00000379516 PNLIPRP2P54317 469 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 EMP2P54851 167 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 RNF4P78317 190 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 DBPQ10586 325 aaPredicted RBP13.77□□□□□ -0.21
SNX2-201ENST00000379516 KLHL12Q53G59 568 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 ZNF385CQ66K41 422 aaPredicted RBP13.77□□□□□ -0.21
SNX2-201ENST00000379516 ATG4DQ86TL0 474 aaPredicted RBP13.77□□□□□ -0.21
SNX2-201ENST00000379516 OR51G2Q8NGK0 314 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 ATOH1Q92858 354 aaPredicted RBP13.77□□□□□ -0.21
SNX2-201ENST00000379516 HCAR1Q9BXC0 346 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 LAT2Q9GZY6 243 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 EXOSC4Q9NPD3 245 aaKnown RBP13.77□□□□□ -0.21
SNX2-201ENST00000379516 TNFRSF10DQ9UBN6 386 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 BAIAP2Q9UQB8 552 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 FER1L5A0AVI2 2057 aa13.77□□□□□ -0.21
SNX2-201ENST00000379516 D6RAR5 112 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 J3QRK9 145 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 HCRTR2O43614 444 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 NDUFB5O43674 189 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 NDUFB2O95178 105 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 PEPDP12955 493 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 ZNF3P17036 446 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 HK1P19367 917 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 SLC1A3P43003 542 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 ZNF117Q03924 483 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 PHC2Q8IXK0 858 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 SLC43A2Q8N370 569 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 SLC37A3Q8NCC5 494 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 MCFD2Q8NI22 146 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 PTP4A1Q93096 173 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 ERMAPQ96PL5 475 aaPredicted RBP13.76□□□□□ -0.21
SNX2-201ENST00000379516 CCNL2Q96S94 520 aaPredicted RBP13.76□□□□□ -0.21
SNX2-201ENST00000379516 SECISBP2Q96T21 854 aaKnown RBP13.76□□□□□ -0.21
SNX2-201ENST00000379516 KLHDC3Q9BQ90 382 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms