RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 CADM2Q8N3J6 435 aa12.58□□□□□ -0.4
UPK1A-202ENST00000379013 PAPD5Q8NDF8 572 aaKnown RBP12.58□□□□□ -0.4
UPK1A-202ENST00000379013 ST6GALNAC3Q8NDV1 305 aa12.58□□□□□ -0.4
UPK1A-202ENST00000379013 GPR119Q8TDV5 335 aa12.58□□□□□ -0.4
UPK1A-202ENST00000379013 SLC25A43Q8WUT9 341 aaPredicted RBP12.58□□□□□ -0.4
UPK1A-202ENST00000379013 ZNF300Q96RE9 604 aaPredicted RBP12.58□□□□□ -0.4
UPK1A-202ENST00000379013 FNDC11Q9BVV2 318 aa12.58□□□□□ -0.4
UPK1A-202ENST00000379013 CHID1Q9BWS9 393 aa12.58□□□□□ -0.4
UPK1A-202ENST00000379013 ZNF703Q9H7S9 590 aaPredicted RBP12.58□□□□□ -0.4
UPK1A-202ENST00000379013 PROK2Q9HC23 129 aa12.58□□□□□ -0.4
UPK1A-202ENST00000379013 DEPPQ9NTK1 212 aa12.58□□□□□ -0.4
UPK1A-202ENST00000379013 ACER3Q9NUN7 267 aa12.58□□□□□ -0.4
UPK1A-202ENST00000379013 PLEKHB1Q9UF11 243 aaPredicted RBP12.58□□□□□ -0.4
UPK1A-202ENST00000379013 FREM3P0C091 2139 aa12.58□□□□□ -0.4
UPK1A-202ENST00000379013 PCNX3Q9H6A9 2034 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 HTR3EA5X5Y0 456 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 C2orf72A6NCS6 295 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 LRRC3CA6NJW4 275 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 GJE1A6NN92 205 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 CHP2O43745 196 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 GLSO94925 669 aaPredicted RBP12.57□□□□□ -0.4
UPK1A-202ENST00000379013 HK1P19367 917 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 FASP25445 335 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 ACAA2P42765 397 aaKnown RBP12.57□□□□□ -0.4
UPK1A-202ENST00000379013 POLR2HP52434 150 aaKnown RBP12.57□□□□□ -0.4
UPK1A-202ENST00000379013 ZNF136P52737 540 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 PPIAP62937 165 aaKnown RBP12.57□□□□□ -0.4
UPK1A-202ENST00000379013 FOXO1Q12778 655 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 PLPPR5Q32ZL2 321 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 ALG10BQ5I7T1 473 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 ENTPD8Q5MY95 495 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 RRM2BQ7LG56 351 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 LINC00471Q8N535 108 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 FAM86B1Q8N7N1 296 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 OR14L1PQ8NHC6 308 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 ADAMTS16Q8TE57 1224 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 PHF10Q8WUB8 498 aaKnown RBP12.57□□□□□ -0.4
UPK1A-202ENST00000379013 GNRHR2Q96P88 292 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 PIP5K1AQ99755 562 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 BDH2Q9BUT1 245 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 RTN4RQ9BZR6 473 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 AMBRA1Q9C0C7 1298 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 OR2B2Q9GZK3 357 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 UBQLN3Q9H347 655 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 REEP1Q9H902 201 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 AGPAT4Q9NRZ5 378 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 MED17Q9NVC6 651 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 OSGIN2Q9Y236 505 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 CHST2Q9Y4C5 530 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 APCP25054 2843 aa12.57□□□□□ -0.4
UPK1A-202ENST00000379013 FBN2P35556 2912 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 ELOA3DA6NLF2 546 aaPredicted RBP12.56□□□□□ -0.4
UPK1A-202ENST00000379013 CPSF4LA6NMK7 179 aaKnown RBP12.56□□□□□ -0.4
UPK1A-202ENST00000379013 TMEM229AB2RXF0 380 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 ANKRD65E5RJM6 399 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 hCG_2039718K7EN88 272 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 ETV2O00321 342 aaPredicted RBP12.56□□□□□ -0.4
UPK1A-202ENST00000379013 ZNHIT1O43257 154 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 FRS3O43559 492 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 ENTPD5O75356 428 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 TRAPPC6AO75865 159 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 EPPINO95925 133 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 CST1P01037 141 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 HPNP05981 417 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 PRKCAP17252 672 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 CXCR1P25024 350 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 RBM34P42696 430 aaKnown RBP12.56□□□□□ -0.4
UPK1A-202ENST00000379013 RNF144AP50876 292 aaPredicted RBP12.56□□□□□ -0.4
UPK1A-202ENST00000379013 DLX5P56178 289 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 VLDLRP98155 873 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 ALDH6A1Q02252 535 aaKnown RBP12.56□□□□□ -0.4
UPK1A-202ENST00000379013 SELENBP1Q13228 472 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 SLC10A1Q14973 349 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 TRAM2Q15035 370 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 OR1Q1Q15612 314 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 NDUFAF6Q330K2 333 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 ELOA3BQ3SY89 546 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 SLC25A53Q5H9E4 307 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 RAET1LQ5VY80 246 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 C3orf33Q6P1S2 294 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 GTPBP8Q8N3Z3 284 aaPredicted RBP12.56□□□□□ -0.4
UPK1A-202ENST00000379013 ELOA3Q8NG57 546 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 OR10Q1Q8NGQ4 319 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 RNF217Q8TC41 542 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 SDCCAG3Q96C92 435 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 C7orf34Q96L11 122 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 HS6ST2Q96MM7 605 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 DCLRE1BQ9H816 532 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 ACKR4Q9NPB9 350 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 NDUFAF4Q9P032 175 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 FBXL2Q9UKC9 423 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 ACAD8Q9UKU7 415 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 TMCC3Q9ULS5 477 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 VDAC3Q9Y277 283 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 MPDZO75970 2070 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 NCKAP5O14513 1909 aa12.56□□□□□ -0.4
UPK1A-202ENST00000379013 CREBBPQ92793 2442 aa12.55□□□□□ -0.4
UPK1A-202ENST00000379013 A0A0B4J2E0 115 aa12.55□□□□□ -0.4
UPK1A-202ENST00000379013 A0A0G2JMM0 328 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms