RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 HNRNPCL3B7ZW38 293 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 HNRNPCL1O60812 293 aaKnown RBP15.19■□□□□ 0.02
RER1-202ENST00000378512 BCHEP06276 602 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 THBS1P07996 1170 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 HNRNPCL4P0DMR1 293 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 IL7RP16871 459 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 GPX2P18283 190 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 APOBEC1P41238 236 aaKnown RBP15.19■□□□□ 0.02
RER1-202ENST00000378512 RAC3P60763 192 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 DAZAP2Q15038 168 aaPredicted RBP15.19■□□□□ 0.02
RER1-202ENST00000378512 TMEM176BQ3YBM2 270 aaPredicted RBP15.19■□□□□ 0.02
RER1-202ENST00000378512 MRPL2Q5T653 305 aaKnown RBP15.19■□□□□ 0.02
RER1-202ENST00000378512 RNF220Q5VTB9 566 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 CGB2Q6NT52 195 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 LUZP2Q86TE4 346 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 CDC20BQ86Y33 519 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 PEX5LQ8IYB4 626 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 C10orf111Q8N326 155 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 LINC01560Q8TB33 94 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 TMEM19Q96HH6 336 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 GP6Q9HCN6 339 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 PLEKHA6Q9Y2H5 1048 aa15.19■□□□□ 0.02
RER1-202ENST00000378512 PRRC2AP48634 2157 aaKnown RBP15.19■□□□□ 0.02
RER1-202ENST00000378512 FREM1Q5H8C1 2179 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 A0A0G2JND7 137 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 ATP8B1O43520 1251 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 CYP7B1O75881 506 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 NUDT7P0C024 238 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 PPIBP23284 216 aaKnown RBP15.18■□□□□ 0.02
RER1-202ENST00000378512 GNA13Q14344 377 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 ZSWIM7Q19AV6 140 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 GRINAQ7Z429 371 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 CNEP1R1Q8N9A8 125 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 OR6K3Q8NGY3 331 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 SLC25A43Q8WUT9 341 aaPredicted RBP15.18■□□□□ 0.02
RER1-202ENST00000378512 IKZF5Q9H5V7 419 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 TIGARQ9NQ88 270 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 ST6GALNAC2Q9UJ37 374 aa15.18■□□□□ 0.02
RER1-202ENST00000378512 TUBAL3A6NHL2 446 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 AP3D1O14617 1153 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 SYNGR4O95473 234 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 PABPC4LP0CB38 370 aaKnown RBP15.17■□□□□ 0.02
RER1-202ENST00000378512 EPXP11678 715 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 NCF2P19878 526 aaPredicted RBP15.17■□□□□ 0.02
RER1-202ENST00000378512 FKBP2P26885 142 aaKnown RBP15.17■□□□□ 0.02
RER1-202ENST00000378512 ACAA2P42765 397 aaKnown RBP15.17■□□□□ 0.02
RER1-202ENST00000378512 EPS8Q12929 822 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 ZNF836Q6ZNA1 936 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 VRK2Q86Y07 508 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 ADGRG3Q86Y34 549 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 OR52P1PQ8NH57 321 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 RSPO3Q9BXY4 272 aaPredicted RBP15.17■□□□□ 0.02
RER1-202ENST00000378512 PRRG4Q9BZD6 226 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 ELOVL5Q9NYP7 299 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 UQCRHLA0A096LP55 91 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 A0A1W2PNR3 127 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 GOSR1O95249 250 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 PGM3O95394 542 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 ARAFP10398 606 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 ETS2P15036 469 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 AGTR1P30556 359 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 HTR3AP46098 478 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 CLK1P49759 484 aaKnown RBP15.17■□□□□ 0.02
RER1-202ENST00000378512 SIRPAP78324 504 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 MERTKQ12866 999 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 RNPS1Q15287 305 aaKnown RBP15.17■□□□□ 0.02
RER1-202ENST00000378512 LIN52Q52LA3 116 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 SYT14P1Q58G82 188 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 RUNDC3AQ59EK9 446 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 GTF2IRD2BQ6EKJ0 949 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 GTF2IRD2Q86UP8 949 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 RETREG3Q86VR2 466 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 ZNF440Q8IYI8 595 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 ZNF610Q8N9Z0 462 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 MAL2Q969L2 176 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 SLC35B4Q969S0 331 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 DACH2Q96NX9 599 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 TMEM120AQ9BXJ8 343 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 ADAM19Q9H013 955 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 OPN3Q9H1Y3 402 aaPredicted RBP15.17■□□□□ 0.02
RER1-202ENST00000378512 TMEM38AQ9H6F2 299 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 CTPS2Q9NRF8 586 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 SERINC1Q9NRX5 453 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 FGFR1OP2Q9NVK5 253 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 RLIMQ9NVW2 624 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 CHRNA9Q9UGM1 479 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 LEF1Q9UJU2 399 aaPredicted RBP15.17■□□□□ 0.02
RER1-202ENST00000378512 ING1Q9UK53 422 aaPredicted RBP15.17■□□□□ 0.02
RER1-202ENST00000378512 ZNF443Q9Y2A4 671 aaPredicted RBP15.17■□□□□ 0.02
RER1-202ENST00000378512 EMC9Q9Y3B6 208 aa15.17■□□□□ 0.02
RER1-202ENST00000378512 CFAP73A6NFT4 308 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 SMNDC1O75940 238 aaKnown RBP eCLIP15.16■□□□□ 0.024e-8■■■□□ 16.4
RER1-202ENST00000378512 CCKARP32238 428 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 RYKP34925 604 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 CD79BP40259 229 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 SLC1A3P43003 542 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 CPA2P48052 419 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 IDH2P48735 452 aaKnown RBP15.16■□□□□ 0.02
RER1-202ENST00000378512 MAP2K6P52564 334 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 GUCY1A3Q02108 690 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms