RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 EVI2BP34910 448 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 DDOSTP39656 456 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 KCNJ10P78508 379 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 FAPQ12884 760 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 GALEQ14376 348 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 TMEM164Q5U3C3 297 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 SLC43A2Q8N370 569 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 FAM83FQ8NEG4 500 aaPredicted RBP7.84□□□□□ -1.15
VPS36-201ENST00000378060 BEST4Q8NFU0 473 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 OR5H6Q8NGV6 325 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 OR2T27Q8NH04 317 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 SLC25A44Q96H78 314 aaPredicted RBP7.84□□□□□ -1.15
VPS36-201ENST00000378060 FCRL1Q96LA6 429 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 ZNF582Q96NG8 517 aaPredicted RBP7.84□□□□□ -1.15
VPS36-201ENST00000378060 CNTNAP3BQ96NU0 1288 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 APOOQ9BUR5 198 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 ALOXE3Q9BYJ1 711 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 EMC3Q9P0I2 261 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 APOBEC3BQ9UH17 382 aaKnown RBP7.84□□□□□ -1.15
VPS36-201ENST00000378060 DKKL1Q9UK85 242 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 NME7Q9Y5B8 376 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 PCDHGA6Q9Y5G7 932 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 NPFFR2Q9Y5X5 522 aa7.84□□□□□ -1.15
VPS36-201ENST00000378060 ZNF850A8MQ14 1090 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 KRBOX1C9JBD0 128 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 SYT7O43581 403 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 HNRNPA2B1P22626 353 aaKnown RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 ELAVL4P26378 380 aaKnown RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 EIF2S3P41091 472 aaKnown RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 TAS2R19P59542 299 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 HHEXQ03014 270 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 CHRNEQ04844 493 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 ZNF616Q08AN1 781 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 SHHQ15465 462 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 OR1Q1Q15612 314 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 OR52E1Q8NGJ3 308 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 DOK4Q8TEW6 326 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 SLC7A6Q92536 515 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 CCDC86Q9H6F5 360 aaKnown RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 ZNF281Q9Y2X9 895 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 SLC22A7Q9Y694 548 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 B8ZZF3 427 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 KLK8O60259 260 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 TPT1P13693 172 aaKnown RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 S100PP25815 95 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 RABIFP47224 123 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 BTG1P62324 171 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 USF2Q15853 346 aaPredicted RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 ALKBH2Q6NS38 261 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 VRK2Q86Y07 508 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 OR1J4Q8NGS1 313 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 OR5K2Q8NHB8 316 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 SLC22A8Q8TCC7 542 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 SMAP2Q8WU79 429 aaPredicted RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 NIPSNAP1Q9BPW8 284 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 CDCA4Q9BXL8 241 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 ACTR10Q9NZ32 417 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 RCE1Q9Y256 329 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 TMEM129A0AVI4 362 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 BLACEA4D250 179 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 DUX1O43812 170 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 TSPAN15O95858 294 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 IGLV3-25P01717 112 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 KLKB1P03952 638 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 UBBP0CG47 229 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 UBCP0CG48 685 aaKnown RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 HTR1FP30939 366 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 IDUAP35475 653 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 DLSTP36957 453 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 GP2P55259 537 aaKnown RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 RPS25P62851 125 aaKnown RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 POU4F3Q15319 338 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 TBC1D25Q3MII6 688 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 PRAMEF8Q5VWM4 474 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 PRAMEF7Q5VXH5 474 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 MBOAT2Q6ZWT7 520 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 TMEM151BQ8IW70 566 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 METTL27Q8N6F8 245 aaPredicted RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 OR7G2Q8NG99 324 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 TSACCQ96A04 125 aaPredicted RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 ZNF285Q96NJ3 590 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 SPIN2AQ99865 258 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 SPIN2BQ9BPZ2 258 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 C19orf43Q9BQ61 176 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 MS4A8Q9BY19 250 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 SAV1Q9H4B6 383 aaPredicted RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 EGLN3Q9H6Z9 239 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 CXorf36Q9H7Y0 433 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 FAM86C1Q9NVL1 165 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 SNX11Q9Y5W9 270 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 KIR2DS5A0A0G2JLQ3 304 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 A0A0G2JNG1 304 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 A0A0J9YY10 115 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 DCDC2BA2VCK2 349 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 OR52A4PA6NMU1 304 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 KIR2DS3K7RE56 304 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 SLC33A1O00400 549 aaPredicted RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 PEX12O00623 359 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 DCNP07585 359 aaKnown RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 MMP2P08253 660 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms