RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 SHQ1Q6PI26 577 aaKnown RBP20.78■□□□□ 0.92
HLA-C-202ENST00000376237 LINC00114Q6XXX2 140 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 HIPK1Q86Z02 1210 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 ZDHHC13Q8IUH4 622 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 OR4C15Q8NGM1 316 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 ACOT11Q8WXI4 607 aaPredicted RBP20.78■□□□□ 0.92
HLA-C-202ENST00000376237 PRSS27Q9BQR3 290 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 ZNF703Q9H7S9 590 aaPredicted RBP20.78■□□□□ 0.92
HLA-C-202ENST00000376237 VNN3Q9NY84 501 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 STOML1Q9UBI4 398 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 OSGIN1Q9UJX0 560 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 LOC400499M0QZD8 3231 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 ELOA3DA6NLF2 546 aaPredicted RBP20.78■□□□□ 0.92
HLA-C-202ENST00000376237 G3V2T6 193 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 ZIC3O60481 467 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 RASAL1O95294 804 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 CXCR1P25024 350 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 MERTKQ12866 999 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 TOMM20Q15388 145 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 INAQ16352 499 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 ELOA3BQ3SY89 546 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 RRM2BQ7LG56 351 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 RNF113BQ8IZP6 322 aaKnown RBP20.78■□□□□ 0.92
HLA-C-202ENST00000376237 GTPBP8Q8N3Z3 284 aaPredicted RBP20.78■□□□□ 0.92
HLA-C-202ENST00000376237 ICA1LQ8NDH6 482 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 ELOA3Q8NG57 546 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 SDCCAG3Q96C92 435 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 FUZQ9BT04 418 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 ZNF426Q9BUY5 554 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 OR2B2Q9GZK3 357 aa20.78■□□□□ 0.92
HLA-C-202ENST00000376237 CASQ2O14958 399 aaPredicted RBP20.77■□□□□ 0.92
HLA-C-202ENST00000376237 HPNP05981 417 aa20.77■□□□□ 0.92
HLA-C-202ENST00000376237 SFTPCP11686 197 aa20.77■□□□□ 0.92
HLA-C-202ENST00000376237 ZNF17P17021 662 aa20.77■□□□□ 0.92
HLA-C-202ENST00000376237 ZNF23P17027 643 aa20.77■□□□□ 0.92
HLA-C-202ENST00000376237 FKBP2P26885 142 aaKnown RBP20.77■□□□□ 0.92
HLA-C-202ENST00000376237 IST1P53990 364 aa20.77■□□□□ 0.92
HLA-C-202ENST00000376237 PPIAP62937 165 aaKnown RBP20.77■□□□□ 0.92
HLA-C-202ENST00000376237 FOXF1Q12946 379 aa20.77■□□□□ 0.92
HLA-C-202ENST00000376237 MICAQ29983 383 aa20.77■□□□□ 0.92
HLA-C-202ENST00000376237 EXOC3L2Q2M3D2 409 aa20.77■□□□□ 0.92
HLA-C-202ENST00000376237 FBXW10Q5XX13 1052 aa20.77■□□□□ 0.92
HLA-C-202ENST00000376237 NKAIN4Q8IVV8 208 aa20.77■□□□□ 0.92
HLA-C-202ENST00000376237 PIGQQ9BRB3 760 aa20.77■□□□□ 0.92
HLA-C-202ENST00000376237 SERINC1Q9NRX5 453 aa20.77■□□□□ 0.92
HLA-C-202ENST00000376237 HEATR5AQ86XA9 2040 aa20.77■□□□□ 0.91
HLA-C-202ENST00000376237 EML6Q6ZMW3 1958 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 A0A087WUU8 490 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 TRBV4-1A0A0J9YWV2 114 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 SH3PXD2BA1X283 911 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 TRAPPC6AO75865 159 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 FUT4P22083 530 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 PPP1R8Q12972 351 aaKnown RBP20.76■□□□□ 0.91
HLA-C-202ENST00000376237 TRIP10Q15642 601 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 TMEM44Q2T9K0 475 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.76■□□□□ 0.91
HLA-C-202ENST00000376237 PODNL1Q6PEZ8 512 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 TTC33Q6PID6 262 aaPredicted RBP20.76■□□□□ 0.91
HLA-C-202ENST00000376237 ADGRG3Q86Y34 549 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 FAM109AQ8N4B1 249 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 TMEM251Q8N6I4 163 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 TMEM239Q8WW34 195 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 EME1Q96AY2 570 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 TMEM43Q9BTV4 400 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 C9orf16Q9BUW7 83 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 OSBPL10Q9BXB5 764 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 SLC19A3Q9BZV2 496 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 OAZ3Q9UMX2 235 aa20.76■□□□□ 0.91
HLA-C-202ENST00000376237 SPIN1Q9Y657 262 aaPredicted RBP20.76■□□□□ 0.91
HLA-C-202ENST00000376237 TMED7-TICAM2A0A0A6YYA0 188 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 HTR3EA5X5Y0 456 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 ARRDC5A6NEK1 342 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 LINC01387J3KSC0 135 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 CCNB2O95067 398 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 ELK4P28324 431 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 IFNGR2P38484 337 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 FOXD4Q12950 439 aaPredicted RBP20.75■□□□□ 0.91
HLA-C-202ENST00000376237 ZNF730Q6ZMV8 503 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 TMEM179BQ7Z7N9 219 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 FAM83FQ8NEG4 500 aaPredicted RBP20.75■□□□□ 0.91
HLA-C-202ENST00000376237 OR14L1PQ8NHC6 308 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 POC1BQ8TC44 478 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 GIPC3Q8TF64 312 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 TMEM255BQ8WV15 326 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 PNPLA2Q96AD5 504 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 ACKR4Q9NPB9 350 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 KRCC1Q9NPI7 259 aaPredicted RBP20.75■□□□□ 0.91
HLA-C-202ENST00000376237 ZNF71Q9NQZ8 489 aaPredicted RBP20.75■□□□□ 0.91
HLA-C-202ENST00000376237 CHRNA9Q9UGM1 479 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 TMED7Q9Y3B3 224 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 MED31Q9Y3C7 131 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 LAMA5O15230 3695 aa20.75■□□□□ 0.91
HLA-C-202ENST00000376237 RFC3P40938 356 aa20.74■□□□□ 0.91
HLA-C-202ENST00000376237 SLC10A1Q14973 349 aa20.74■□□□□ 0.91
HLA-C-202ENST00000376237 RAET1LQ5VY80 246 aa20.74■□□□□ 0.91
HLA-C-202ENST00000376237 SLC6A19Q695T7 634 aa20.74■□□□□ 0.91
HLA-C-202ENST00000376237 C5orf46Q6UWT4 87 aa20.74■□□□□ 0.91
HLA-C-202ENST00000376237 WDR88Q6ZMY6 472 aa20.74■□□□□ 0.91
HLA-C-202ENST00000376237 MBOAT2Q6ZWT7 520 aa20.74■□□□□ 0.91
HLA-C-202ENST00000376237 PSD2Q9BQI7 771 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms