RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 H0YGG7 62 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 CHP2O43745 196 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 ARF3P61204 181 aaPredicted RBP13.43□□□□□ -0.26
MSH5-201ENST00000375703 ACTC1P68032 377 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 ACTA1P68133 377 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 CLPPQ16740 277 aaPredicted RBP13.43□□□□□ -0.26
MSH5-201ENST00000375703 SLC36A2Q495M3 483 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 HACD4Q5VWC8 232 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 ZAR1Q86SH2 424 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 OR5H6Q8NGV6 325 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 PEX11GQ96HA9 241 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 PTCHD1Q96NR3 888 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 ZFYVE21Q9BQ24 234 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 TTTY10Q9BZA0 68 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 CERS4Q9HA82 394 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 NUDT15Q9NV35 164 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 FLRT3Q9NZU0 649 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 PCOLCE2Q9UKZ9 415 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 IFNGP01579 166 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 CAPZA2P47755 286 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 PLAURQ03405 335 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 POU4F2Q12837 409 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 TP53I3Q53FA7 332 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 SDE2Q6IQ49 451 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 ZC3H14Q6PJT7 736 aaKnown RBP13.43□□□□□ -0.26
MSH5-201ENST00000375703 LYPD4Q6UWN0 246 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 ZNF767PQ75MW2 155 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 GHDCQ8N2G8 530 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 TOMM5Q8N4H5 51 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 THAP4Q8WY91 577 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 PMM1Q92871 262 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 ZFP3Q96NJ6 502 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 CITED4Q96RK1 184 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.43□□□□□ -0.26
MSH5-201ENST00000375703 IL21RQ9HBE5 538 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 STMN3Q9NZ72 180 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 ING4Q9UNL4 249 aa13.43□□□□□ -0.26
MSH5-201ENST00000375703 A0A0B4J2E0 115 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 A0A1B0GWA3 101 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 A0A1B0GX12 115 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 CYR61O00622 381 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 RASGRP1O95267 797 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 SERPINA3P01011 423 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 CD3GP09693 182 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 NTSR1P30989 418 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 SLC6A6P31641 620 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 MAP3K8P41279 467 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 TNFRSF4P43489 277 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 KIAA1024LP59773 190 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 MGAT2Q10469 447 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 TMEM196Q5HYL7 178 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 ARL14Q8N4G2 192 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 OR52E2Q8NGJ4 325 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 FAM131CQ96AQ9 280 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 ERMAPQ96PL5 475 aaPredicted RBP13.42□□□□□ -0.26
MSH5-201ENST00000375703 SMAD5Q99717 465 aaKnown RBP13.42□□□□□ -0.26
MSH5-201ENST00000375703 CDH23Q9H251 3354 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 ATG2BQ96BY7 2078 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 GRXCR1A8MXD5 290 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 MAGEB4O15481 346 aaPredicted RBP13.42□□□□□ -0.26
MSH5-201ENST00000375703 TCRBP04435 133 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 HOXC4P09017 264 aaPredicted RBP13.42□□□□□ -0.26
MSH5-201ENST00000375703 NFATC4Q14934 902 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 RNASE12Q5GAN4 147 aaKnown RBP13.42□□□□□ -0.26
MSH5-201ENST00000375703 ANKRD54Q6NXT1 300 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 SYT9Q86SS6 491 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 FAM3CQ92520 227 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 ZMYND19Q96E35 227 aaPredicted RBP13.42□□□□□ -0.26
MSH5-201ENST00000375703 SCMH1Q96GD3 660 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 WDR92Q96MX6 357 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 GHITMQ9H3K2 345 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 IGFLR1Q9H665 355 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 ST6GALNAC2Q9UJ37 374 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 ZNF222Q9UK12 451 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 NUBP2Q9Y5Y2 271 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 SCN2AQ99250 2005 aa13.42□□□□□ -0.26
MSH5-201ENST00000375703 TRAV1-2A0A0B4J238 106 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 TNFRSF10AO00220 468 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 CA3P07451 260 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 SNRPBP14678 240 aaKnown RBP13.41□□□□□ -0.26
MSH5-201ENST00000375703 PVRP15151 417 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 STOMP27105 288 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 PITPNAQ00169 270 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 GPR18Q14330 331 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 ALG10BQ5I7T1 473 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 ARHGAP11AQ6P4F7 1023 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 RFLNBQ8N5W9 214 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 FAM98AQ8NCA5 519 aaKnown RBP13.41□□□□□ -0.26
MSH5-201ENST00000375703 HSD17B8Q92506 261 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 RPP25Q9BUL9 199 aaKnown RBP13.41□□□□□ -0.26
MSH5-201ENST00000375703 MCCC2Q9HCC0 563 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 BRD7Q9NPI1 651 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 TEKT2Q9UIF3 430 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 C2orf16Q68DN1 1984 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 A0A0B4J203 849 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 TEX13CA0A0J9YWL9 993 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 OGG1O15527 345 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 HYAL3O43820 417 aaPredicted RBP13.41□□□□□ -0.26
MSH5-201ENST00000375703 TSC22D2O75157 780 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 UBL3O95164 117 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms