RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PPIEQ9UNP9 301 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 WDR45Q9Y484 360 aa13.07□□□□□ -0.32
CLCNKA-202ENST00000375692 NPIPA5A0A0B4J1W7 369 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 PRR23D1E9PI22 279 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 NPIPA7E9PJI5 369 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 G3V3Q6 166 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 GMDSO60547 372 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 UBL3O95164 117 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 ADRB1P08588 477 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 NPIPA8P0DM63 369 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 PRR23D2P0DMB1 279 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 MMP15P51511 669 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 NLRC3Q7RTR2 1065 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 SMRP1Q8NCR6 262 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 HGDQ93099 445 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 ORAI1Q96D31 301 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 ADGRL4Q9HBW9 690 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 MRPS30Q9NP92 439 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 KCMF1Q9P0J7 381 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 UBQLN2Q9UHD9 624 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 ZNF223Q9UK11 482 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 KCNK6Q9Y257 313 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 SLC27A6Q9Y2P4 619 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 AK6Q9Y3D8 172 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 ZNF780BQ9Y6R6 833 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 TRAV27A0A087WT01 109 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 SC5DO75845 299 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 IFNA7P01567 189 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 SBK2P0C263 348 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 BTN3A2P78410 334 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 HNRNPA1L2Q32P51 320 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 TP53I3Q53FA7 332 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 TMEM255AQ5JRV8 349 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 CLLU1Q5K131 121 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 RTL4Q6ZR62 310 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 Q6ZTK2 550 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 BTN2A1Q7KYR7 527 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 KANSL1Q7Z3B3 1105 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 FTMTQ8N4E7 242 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 TMIEQ8NEW7 156 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 OR2L5Q8NG80 312 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 RPLP0P6Q8NHW5 317 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 SMPDL3BQ92485 455 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 MTHFD2LQ9H903 347 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 FBXO34Q9NWN3 711 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 OBP2AQ9NY56 170 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 SPHK1Q9NYA1 384 aa13.06□□□□□ -0.32
CLCNKA-202ENST00000375692 TRPM6Q9BX84 2022 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 LRRN3E7EW58 273 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 EPXP11678 715 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 P2RY2P41231 377 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 CRMP1Q14194 572 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 SUZ12Q15022 739 aaKnown RBP13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 PDGFRLQ15198 375 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 DUSP5Q16690 384 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 TJAP1Q5JTD0 557 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 MFSD12Q6NUT3 480 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 CHMP1BQ7LBR1 199 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 CDH24Q86UP0 819 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 LNX2Q8N448 690 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 MS4A15Q8N5U1 240 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 KCT2Q8NC54 265 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 HAVCR2Q8TDQ0 301 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 TMEM239Q8WW34 195 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 LRRN3Q9H3W5 708 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 MBNL1Q9NR56 388 aaKnown RBP13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 WASP42768 502 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 RAB28P51157 221 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 KLF9Q13886 244 aaPredicted RBP13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 KRT33BQ14525 404 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 TMEM52BQ4KMG9 183 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 DMKNQ6E0U4 476 aaPredicted RBP13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 HEPHL1Q6MZM0 1159 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 ADAMTSL4Q6UY14 1074 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 SHISA5Q8N114 240 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 SLC44A3Q8N4M1 653 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 GALNT11Q8NCW6 608 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 OR51L1Q8NGJ5 315 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 HMGB4Q8WW32 186 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 ZNF436Q9C0F3 470 aaPredicted RBP13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 SCP2D1Q9UJQ7 156 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 SCML1Q9UN30 329 aa13.05□□□□□ -0.32
CLCNKA-202ENST00000375692 A0A1B0GVI7 797 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 DNAJB6O75190 326 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 ASGR2P07307 311 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 SAGP10523 405 aaPredicted RBP13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 PEPDP12955 493 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 GDNFP39905 211 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 NRG3P56975 720 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 ZNF234Q14588 700 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 OR1Q1Q15612 314 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 HACD4Q5VWC8 232 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 FAAH2Q6GMR7 532 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 TTLQ8NG68 377 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 ELSPBP1Q96BH3 223 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 DDOQ99489 341 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 C20orf85Q9H1P6 137 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 OR10A4Q9H209 315 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 FN3KQ9H479 309 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 CMC2Q9NRP2 79 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms