RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 C5orf51A6NDU8 294 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 RGS9O75916 674 aaPredicted RBP16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 GDF1P27539 372 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 HSD17B7P56937 341 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 ARG2P78540 354 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 GLO1Q04760 184 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 CRMP1Q14194 572 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 HYAL4Q2M3T9 481 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 SLC6A19Q695T7 634 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 MARCH3Q86UD3 253 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 OR5W2Q8NH69 310 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 SLC46A1Q96NT5 459 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 PRDM9Q9NQV7 894 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 ZNF638Q14966 1978 aaKnown RBP16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 OR6C70A6NIJ9 312 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 K7EQS6 105 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 RAB40BQ12829 278 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 LINC00696Q6ZRV3 163 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 CDH24Q86UP0 819 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 DNAJC22Q8N4W6 341 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 FAM71F1Q96KD3 344 aaPredicted RBP16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 KLHL15Q96M94 604 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 CITED4Q96RK1 184 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 CCNL2Q96S94 520 aaPredicted RBP16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 LYRM4Q9HD34 91 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 MUTYHQ9UIF7 546 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 ZNF337Q9Y3M9 751 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 IDSB3KWA1 339 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 CAPZBP47756 277 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 SNU13P55769 128 aaKnown RBP16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 GNG2P59768 71 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 PRICKLE2Q7Z3G6 844 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 OR4C15Q8NGM1 316 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 OR5AK2Q8NH90 309 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 MANEAQ5SRI9 462 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 ZNF613Q6PF04 617 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 FOXRED2Q8IWF2 684 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 STT3BQ8TCJ2 826 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 HRASLS5Q96KN8 279 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 SLC25A18Q9H1K4 315 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 UCKL1Q9NWZ5 548 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 CEPT1Q9Y6K0 416 aa16.66■□□□□ 0.26
PTPDC1-202ENST00000375360 TRIM23P36406 574 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 MAGEA2P43356 314 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 EIF2B1Q14232 305 aaKnown RBP16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 FRMD6Q96NE9 622 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 C19orf53Q9UNZ5 99 aaPredicted RBP16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 TSPAN11A1L157 253 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 LRRN3E7EW58 273 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 CELA2BP08218 269 aaPredicted RBP16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 TEAD1P28347 426 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 PRKAR1BP31321 381 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 PTOV1Q86YD1 416 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 ENTHD1Q8IYW4 607 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 OR13C3Q8NGS6 347 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 CEP76Q8TAP6 659 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 RFT1Q96AA3 541 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 NMNAT3Q96T66 252 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 LRRN3Q9H3W5 708 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 CXorf51AA0A1B0GTR3 108 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 LMO7DNF2Z398 122 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 UPK1AO00322 258 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 SAXO2Q658L1 398 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 ZNF322Q6U7Q0 402 aaPredicted RBP16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 SLC35D2Q76EJ3 337 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 SLITRK4Q8IW52 837 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 SLC37A3Q8NCC5 494 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 ACER3Q9NUN7 267 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 EIF3KQ9UBQ5 218 aaKnown RBP16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 SCN3AQ9NY46 2000 aa16.65■□□□□ 0.26
PTPDC1-202ENST00000375360 A0A087WUU8 490 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 PIP5K1CO60331 668 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 PTHP01270 115 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 FXYD6P3P58550 94 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 TIAL1Q01085 375 aaKnown RBP eCLIP16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 KIAA0040Q15053 153 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 C9orf135Q5VTT2 229 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 VASNQ6EMK4 673 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 OR7E24Q6IFN5 339 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 TMPPEQ6ZT21 453 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 MEPCEQ7L2J0 689 aaKnown RBP16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 SP7Q8TDD2 431 aaPredicted RBP16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 CST11Q9H112 138 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 SEMA4GQ9NTN9 838 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 SLC6A14Q9UN76 642 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 SLC22A7Q9Y694 548 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 INMT-MINDY4F8WBC2 141 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 SYT5O00445 386 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 CHRM4P08173 479 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 ILKQ13418 452 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 CASTOR1Q8WTX7 329 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 ZFAND2BQ8WV99 257 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 INTS14Q96SY0 518 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 MED11Q9P086 117 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 ENPP5Q9UJA9 477 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 CRABP1P29762 137 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 FRKP42685 505 aaPredicted RBP16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 CAV3P56539 151 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 ACSM3Q53FZ2 586 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 MBOAT2Q6ZWT7 520 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms