RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 HTD2P86397 168 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 OPN5Q6U736 354 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 ABHD12BQ7Z5M8 362 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-204ENST00000375290 ADGRE4PQ86SQ3 457 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 PLPP5Q8NEB5 264 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 CSNK2A3Q8NEV1 391 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 IRF7Q92985 503 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 LRRC46Q96FV0 321 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 CMSS1Q9BQ75 279 aaKnown RBP9.55□□□□□ -0.88
PTCH1-204ENST00000375290 PSMD9O00233 223 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 CTDSP2O14595 271 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 GABRA3P34903 492 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 PRLHRP49683 370 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF792Q3KQV3 632 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 TMEM225Q6GV28 225 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 KHSRPQ92945 711 aaKnown RBP eCLIP9.55□□□□□ -0.88
PTCH1-204ENST00000375290 C4orf36Q96KX1 117 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 PKMYT1Q99640 499 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 GPR4P46093 362 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 F2RL1P55085 397 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF74Q16587 644 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 DPPA4Q7L190 304 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 OR51A7Q8NH64 312 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 MSI2Q96DH6 328 aaKnown RBP9.55□□□□□ -0.88
PTCH1-204ENST00000375290 TRABD2BA6NFA1 517 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 FGF9P31371 208 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-204ENST00000375290 DAPP51397 102 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF485Q8NCK3 441 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 SLC46A1Q96NT5 459 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 MAS1P04201 325 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 OR4Q2P0C623 313 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 CAV2P51636 162 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 GFOD2Q3B7J2 385 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF425Q6IV72 752 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 PRSS35Q8N3Z0 413 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 PCYT2Q99447 389 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 GIMAP2Q9UG22 337 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 B3GALNT1O75752 331 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 TSPAN12O95859 305 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 AQP2P41181 271 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 AKR1C2P52895 323 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 KIAA1958Q8N8K9 716 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 RPL10LQ96L21 214 aaKnown RBP9.55□□□□□ -0.88
PTCH1-204ENST00000375290 PTCHD1Q96NR3 888 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 ADM5C9JUS6 153 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 B4GAT1O43505 415 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 PPA1Q15181 289 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 SF3B4Q15427 424 aaKnown RBP eCLIP9.55□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF679Q8IYX0 411 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF582Q96NG8 517 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF629Q9UEG4 869 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-204ENST00000375290 CHRNA9Q9UGM1 479 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 SGSHP51688 502 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 POMZP3Q6PJE2 187 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 B3GLCTQ6Y288 498 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 RNF111Q6ZNA4 994 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 STEAP1Q9UHE8 339 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 LOC102723532A0A0G2JNH3 316 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 NAGAP17050 411 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 CXADRP78310 365 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 ACVR1Q04771 509 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF791Q3KP31 576 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-204ENST00000375290 LRFN4Q6PJG9 635 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 INSL6Q9Y581 213 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 MYH14Q7Z406 1995 aaKnown RBP9.54□□□□□ -0.88
PTCH1-204ENST00000375290 OR6C65A6NJZ3 312 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 FADS1O60427 444 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 MMP15P51511 669 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 GP2P55259 537 aaKnown RBP9.54□□□□□ -0.88
PTCH1-204ENST00000375290 MPPED2Q15777 294 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 PLPP6Q8IY26 295 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 FAM160A2Q8N612 972 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-204ENST00000375290 VNN3Q9NY84 501 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 PCDHGA6Q9Y5G7 932 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 ANTXRLA6NF34 631 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 FAM72CH0Y354 149 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 CYB5BO43169 146 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 PTPN6P29350 595 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 GTDC1Q4AE62 458 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 FAM72AQ5TYM5 149 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 TMEM164Q5U3C3 297 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 FAM72DQ6L9T8 149 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 C19orf35Q6ZS72 473 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 Q6ZVU0 165 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 FAM72BQ86X60 149 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 ACVR1CQ8NER5 493 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 OR10Q1Q8NGQ4 319 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 UHRF2Q96PU4 802 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF840PA6NDX5 716 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 CAPNS1P04632 268 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 CPN1P15169 458 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 C5AR1P21730 350 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 SOX2P48431 317 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 HTR4Q13639 388 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 DCST2Q5T1A1 773 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 METTL7AQ9H8H3 244 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 PATZ1Q9HBE1 687 aaKnown RBP9.54□□□□□ -0.88
PTCH1-204ENST00000375290 RCE1Q9Y256 329 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 SIGIRRQ6IA17 410 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 TPOP07202 933 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms