RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 PRSS48Q7RTY5 328 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 ISCA2Q86U28 154 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 TERB2Q8NHR7 220 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 EDAQ92838 391 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 THAP7Q9BT49 309 aaPredicted RBP13.41□□□□□ -0.26
TRAF1-201ENST00000373887 MTHFD2LQ9H903 347 aaPredicted RBP13.41□□□□□ -0.26
TRAF1-201ENST00000373887 PUS1Q9Y606 427 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRAF1-201ENST00000373887 SORBS2O94875 1100 aaKnown RBP13.41□□□□□ -0.26
TRAF1-201ENST00000373887 PTTG1O95997 202 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 EEF1A1P68104 462 aaKnown RBP13.41□□□□□ -0.26
TRAF1-201ENST00000373887 PIN1Q13526 163 aaPredicted RBP13.41□□□□□ -0.26
TRAF1-201ENST00000373887 SF3A2Q15428 464 aaKnown RBP13.41□□□□□ -0.26
TRAF1-201ENST00000373887 GTDC1Q4AE62 458 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 NIPAL3Q6P499 406 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 NMNAT2Q9BZQ4 307 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 PELI2Q9HAT8 420 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 PRMT8Q9NR22 394 aaPredicted RBP13.41□□□□□ -0.26
TRAF1-201ENST00000373887 IL17CQ9P0M4 197 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 POLHQ9Y253 713 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 TTLL8A6PVC2 850 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 GYPBP06028 91 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 PEA15Q15121 130 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 MOB3CQ70IA8 216 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 PIWIL3Q7Z3Z3 882 aaKnown RBP13.41□□□□□ -0.26
TRAF1-201ENST00000373887 GDPD1Q8N9F7 314 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 KLHL33A6NCF5 533 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 WASH4PA8MWX3 477 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 UPK1BO75841 260 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 NOVP48745 357 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 MRPS21P82921 87 aaKnown RBP13.41□□□□□ -0.26
TRAF1-201ENST00000373887 MBTPS1Q14703 1052 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 NOXA1Q86UR1 476 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 SULF2Q8IWU5 870 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 PDCD1LG2Q9BQ51 273 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 OR51J1Q9H342 316 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 ZNF696Q9H7X3 374 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 PLEK2Q9NYT0 353 aa13.41□□□□□ -0.26
TRAF1-201ENST00000373887 DENRO43583 198 aaKnown RBP13.4□□□□□ -0.26
TRAF1-201ENST00000373887 ENSAO43768 121 aaKnown RBP13.4□□□□□ -0.26
TRAF1-201ENST00000373887 ZNF44P15621 663 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 KITLGP21583 273 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 MYF6P23409 242 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 WNT4P56705 351 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 MANEAQ5SRI9 462 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 KCNIP4Q6PIL6 250 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 RANBP10Q6VN20 620 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 MINDY1Q8N5J2 469 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 OR52R1Q8NGF1 315 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 ZNF486Q96H40 463 aaPredicted RBP13.4□□□□□ -0.26
TRAF1-201ENST00000373887 ZNF355PQ9NSJ1 428 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 SLX4Q8IY92 1834 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 BHLHE40O14503 412 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 FBXO24O75426 580 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 APOA2P02652 100 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 ABOP16442 354 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 CLDN8P56748 225 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 TMEM240Q5SV17 173 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 IL20RBQ6UXL0 311 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 STEAP2Q8NFT2 490 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 C3orf49Q96BT1 292 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 DNAJC15Q9Y5T4 150 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 G3V3Y1 287 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 SLC2A1P11166 492 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 RAB5CP51148 216 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 FOXA1P55317 472 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 TMIGD2Q96BF3 282 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 OR51E2Q9H255 320 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 SLAMF7Q9NQ25 335 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 SCRG1O75711 98 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 NCR1O76036 304 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 NXPH3O95157 252 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 NDUFB2O95178 105 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 CHRM4P08173 479 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 F3P13726 295 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 DAP3P51398 398 aaKnown RBP13.4□□□□□ -0.26
TRAF1-201ENST00000373887 SLC9A3R2Q15599 337 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 TMEM201Q5SNT2 666 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 VN1R2Q8NFZ6 395 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 OBP2BQ9NPH6 170 aa13.4□□□□□ -0.26
TRAF1-201ENST00000373887 ACPPP15309 386 aa13.4□□□□□ -0.27
TRAF1-201ENST00000373887 CCR7P32248 378 aa13.4□□□□□ -0.27
TRAF1-201ENST00000373887 SMIM15Q7Z3B0 74 aa13.4□□□□□ -0.27
TRAF1-201ENST00000373887 ZBTB8AQ96BR9 441 aa13.4□□□□□ -0.27
TRAF1-201ENST00000373887 TNFSF4P23510 183 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 SPOCK1Q08629 439 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 RGNQ15493 299 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 OR10A5Q9H207 317 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 OR10A2Q9H208 303 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 MYH3P11055 1940 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 MYH8P13535 1937 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 NSG1A0A0A6YYJ2 146 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 A6NHS1 94 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 CRABP1P29762 137 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 CHRNB4P30926 498 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 PRPS1P60891 318 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 CHRNEQ04844 493 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 RUNX2Q13950 521 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 VHLLQ6RSH7 139 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 ABHD12BQ7Z5M8 362 aaPredicted RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 DNAJC22Q8N4W6 341 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms