RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 OLIG3Q7RTU3 272 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 SLC22A9Q8IVM8 553 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 ZNF527Q8NB42 609 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 OR5W2Q8NH69 310 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.45□□□□□ -0.26
SSR4-204ENST00000370087 STACQ99469 402 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 TRMOQ9BU70 441 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 ACSS1Q9NUB1 689 aaPredicted RBP13.45□□□□□ -0.26
SSR4-204ENST00000370087 ZCCHC3Q9NUD5 404 aaKnown RBP13.45□□□□□ -0.26
SSR4-204ENST00000370087 ASB6Q9NWX5 421 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 MOKQ9UQ07 419 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 NOSIPQ9Y314 301 aaKnown RBP13.45□□□□□ -0.26
SSR4-204ENST00000370087 FKBP7Q9Y680 259 aa13.45□□□□□ -0.26
SSR4-204ENST00000370087 VENTXO95231 258 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 HSPA4LO95757 839 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 EGR1P18146 543 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 ATP6V1C1P21283 382 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 PRPH2P23942 346 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 ATP12AP54707 1039 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 SKP2Q13309 424 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 IQCCQ4KMZ1 466 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 CLEC6AQ6EIG7 209 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 TMPPEQ6ZT21 453 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 FRMD7Q6ZUT3 714 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 CCT7Q99832 543 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 THUMPD3Q9BV44 507 aaKnown RBP13.44□□□□□ -0.26
SSR4-204ENST00000370087 SLC17A5Q9NRA2 495 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 EMC3Q9P0I2 261 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 KCNE5Q9UJ90 142 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 DTNAQ9Y4J8 743 aa13.44□□□□□ -0.26
SSR4-204ENST00000370087 LOC390937A0A1W2PQ73 354 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 G3V2L1 256 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 H3BNH8 94 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 SULT2B1O00204 365 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 ZNF264O43296 627 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 DNAJA2O60884 412 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 BCAS1O75363 584 aaPredicted RBP13.43□□□□□ -0.26
SSR4-204ENST00000370087 UBL4AP11441 157 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 SESN3P58005 492 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 CBFBQ13951 182 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 MLC1Q15049 377 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 PDK3Q15120 406 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 ZSWIM7Q19AV6 140 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 SYT14P1Q58G82 188 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 PDZK1Q5T2W1 519 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 TIFABQ6ZNK6 161 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 MTDHQ86UE4 582 aaKnown RBP13.43□□□□□ -0.26
SSR4-204ENST00000370087 CCDC103Q8IW40 242 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 TOR1AIP2Q8NFQ8 470 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 SEMA6DQ8NFY4 1073 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 ARL5BQ96KC2 179 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 HOXD1Q9GZZ0 328 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 FKRPQ9H9S5 495 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 RRAGDQ9NQL2 400 aaPredicted RBP13.43□□□□□ -0.26
SSR4-204ENST00000370087 GPATCH2Q9NW75 528 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 C1orf109Q9NX04 203 aa13.43□□□□□ -0.26
SSR4-204ENST00000370087 NUP214P35658 2090 aaPredicted RBP13.43□□□□□ -0.26
SSR4-204ENST00000370087 BMP4P12644 408 aa13.42□□□□□ -0.26
SSR4-204ENST00000370087 ECHS1P30084 290 aa13.42□□□□□ -0.26
SSR4-204ENST00000370087 RPL38P63173 70 aaKnown RBP13.42□□□□□ -0.26
SSR4-204ENST00000370087 MERTKQ12866 999 aa13.42□□□□□ -0.26
SSR4-204ENST00000370087 RFTN2Q52LD8 501 aaPredicted RBP13.42□□□□□ -0.26
SSR4-204ENST00000370087 TRMT10CQ7L0Y3 403 aaKnown RBP13.42□□□□□ -0.26
SSR4-204ENST00000370087 CNPY4Q8N129 248 aa13.42□□□□□ -0.26
SSR4-204ENST00000370087 OR5D16Q8NGK9 328 aa13.42□□□□□ -0.26
SSR4-204ENST00000370087 VRK1Q99986 396 aaPredicted RBP13.42□□□□□ -0.26
SSR4-204ENST00000370087 ACTRT3Q9BYD9 372 aa13.42□□□□□ -0.26
SSR4-204ENST00000370087 TUBB1Q9H4B7 451 aa13.42□□□□□ -0.26
SSR4-204ENST00000370087 SLC7A10Q9NS82 523 aa13.42□□□□□ -0.26
SSR4-204ENST00000370087 PKD1L1Q8TDX9 2849 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 A0A087WUV0 522 aaPredicted RBP13.41□□□□□ -0.26
SSR4-204ENST00000370087 EIF4E2O60573 245 aaKnown RBP13.41□□□□□ -0.26
SSR4-204ENST00000370087 CRCPO75575 148 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 CYP7B1O75881 506 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 SRP14P37108 136 aaKnown RBP13.41□□□□□ -0.26
SSR4-204ENST00000370087 SLC16A1P53985 500 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 SNRPD2P62316 118 aaKnown RBP13.41□□□□□ -0.26
SSR4-204ENST00000370087 CSNK2A1P68400 391 aaPredicted RBP13.41□□□□□ -0.26
SSR4-204ENST00000370087 TP53BP2Q13625 1128 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 OR7E24Q6IFN5 339 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 CASP12Q6UXS9 341 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 ZYG11AQ6WRX3 759 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 RINLQ6ZS11 566 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 SLC46A3Q7Z3Q1 461 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 OR7A2PQ8NGA2 310 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 ST8SIA1Q92185 356 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 BHLHE41Q9C0J9 482 aaPredicted RBP13.41□□□□□ -0.26
SSR4-204ENST00000370087 OR11A1Q9GZK7 315 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 IQCGQ9H095 443 aaKnown RBP13.41□□□□□ -0.26
SSR4-204ENST00000370087 SERHL2Q9H4I8 314 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 TMEFF2Q9UIK5 374 aaPredicted RBP13.41□□□□□ -0.26
SSR4-204ENST00000370087 AMDHD2Q9Y303 409 aa13.41□□□□□ -0.26
SSR4-204ENST00000370087 IGHV1-18A0A0C4DH31 117 aa13.4□□□□□ -0.26
SSR4-204ENST00000370087 EXOC1LA0A1B0GW35 172 aa13.4□□□□□ -0.26
SSR4-204ENST00000370087 SERINC4A6NH21 518 aa13.4□□□□□ -0.26
SSR4-204ENST00000370087 LILRA1O75019 489 aa13.4□□□□□ -0.26
SSR4-204ENST00000370087 MRPL33O75394 65 aaKnown RBP13.4□□□□□ -0.26
SSR4-204ENST00000370087 STAMBPO95630 424 aa13.4□□□□□ -0.26
SSR4-204ENST00000370087 TFPIP10646 304 aa13.4□□□□□ -0.26
SSR4-204ENST00000370087 UROSP10746 265 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms